RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TFF2Q03403 129 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 SEMA3FQ13275 785 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 GRB10Q13322 594 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 USP17L6PQ6QN14 398 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 CUL5Q93034 780 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 ATP6V0A1Q93050 837 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 UHRF1Q96T88 793 aaPredicted RBP25.11■■□□□ 1.61
DDX39A-215ENST00000590696 RSPH10B2B2RC85 870 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 FIBPO43427 364 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 LGR5O75473 907 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 GJB5O95377 273 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 RSPH10BP0C881 870 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 SMIM10L2AP0DMW4 78 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 SMIM10L2BP0DMW5 78 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 SMARCA1P28370 1054 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 METTL7BQ6UX53 244 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 NFXL1Q6ZNB6 911 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 RAD9AQ99638 391 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 MTA3Q9BTC8 594 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 USP26Q9BXU7 913 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 RNPEPQ9H4A4 650 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 SEC63Q9UGP8 760 aaKnown RBP25.1■■□□□ 1.61
DDX39A-215ENST00000590696 EMSYQ7Z589 1322 aa25.1■■□□□ 1.61
DDX39A-215ENST00000590696 MEIS2O14770 477 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 HOXC8P31273 242 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 MCM5P33992 734 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 TMTC2Q8N394 836 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 GPR20Q99678 358 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 LZTS2Q9BRK4 669 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 LSG1Q9H089 658 aaKnown RBP25.09■■□□□ 1.61
DDX39A-215ENST00000590696 MUC3AQ02505 3323 aa25.09■■□□□ 1.61
DDX39A-215ENST00000590696 PRRC2BQ5JSZ5 2229 aaKnown RBP25.09■■□□□ 1.61
DDX39A-215ENST00000590696 CCDC69A6NI79 296 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 SH2B2O14492 632 aaPredicted RBP25.08■■□□□ 1.61
DDX39A-215ENST00000590696 TREHO43280 583 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 LPXNO60711 386 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 PLEKHA8P1O95397 391 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 GNAQP50148 359 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 AAK1Q2M2I8 961 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 PCNX4Q63HM2 1172 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 FAM117BQ6P1L5 589 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 SRBD1Q8N5C6 995 aaKnown RBP25.08■■□□□ 1.61
DDX39A-215ENST00000590696 DBF4BQ8NFT6 615 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 TMEM87BQ96K49 555 aa25.08■■□□□ 1.61
DDX39A-215ENST00000590696 XIRP2A4UGR9 3374 aa25.08■■□□□ 1.6
DDX39A-215ENST00000590696 PIK3CDO00329 1044 aa25.07■■□□□ 1.6
DDX39A-215ENST00000590696 BMP1P13497 986 aa25.07■■□□□ 1.6
DDX39A-215ENST00000590696 COL9A3Q14050 684 aaPredicted RBP25.07■■□□□ 1.6
DDX39A-215ENST00000590696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.07■■□□□ 1.61e-6■■■■□ 20.8
DDX39A-215ENST00000590696 CMTR1Q8N1G2 835 aaKnown RBP25.07■■□□□ 1.6
DDX39A-215ENST00000590696 TELO2Q9Y4R8 837 aa25.07■■□□□ 1.6
DDX39A-215ENST00000590696 DOCK5Q9H7D0 1870 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 SLC27A2O14975 620 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 RXRAP19793 462 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 KCNQ1P51787 676 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 UTP14CQ5TAP6 766 aaKnown RBP25.06■■□□□ 1.6
DDX39A-215ENST00000590696 XRRA1Q6P2D8 792 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 NLRX1Q86UT6 975 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 SENP7Q9BQF6 1050 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 SETD4Q9NVD3 440 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 MTUS1Q9ULD2 1270 aa25.06■■□□□ 1.6
DDX39A-215ENST00000590696 COL4A4P53420 1690 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-215ENST00000590696 LINC01553A4QN01 128 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 SP4Q02446 784 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 PLEKHG4Q58EX7 1191 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 TRIM50Q86XT4 487 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 GDPD5Q8WTR4 605 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 TGS1Q96RS0 853 aaKnown RBP25.05■■□□□ 1.6
DDX39A-215ENST00000590696 ESYT1Q9BSJ8 1104 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 ZNF215Q9UL58 517 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-215ENST00000590696 COG5Q9UP83 839 aa25.05■■□□□ 1.6
DDX39A-215ENST00000590696 AMHP03971 560 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 CALM1P0DP23 149 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 CALM2P0DP24 149 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 CALM3P0DP25 149 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 GNAT1P11488 350 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 LIFRP42702 1097 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 ERVK-21P61565 698 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 CREB3L3Q68CJ9 461 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 RAB11FIP4Q86YS3 637 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 MYOCDQ8IZQ8 938 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 NECAB3Q96P71 396 aaPredicted RBP25.04■■□□□ 1.6
DDX39A-215ENST00000590696 PSTPIP2Q9H939 334 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 SUGCTQ9HAC7 445 aa25.04■■□□□ 1.6
DDX39A-215ENST00000590696 TCF20Q9UGU0 1960 aaKnown RBP25.04■■□□□ 1.6
DDX39A-215ENST00000590696 CTSHP09668 335 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 MKRN4PQ13434 485 aaPredicted RBP25.03■■□□□ 1.6
DDX39A-215ENST00000590696 NECTIN1Q15223 517 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 CCDC82Q8N4S0 544 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 GIMAP8Q8ND71 665 aaPredicted RBP25.03■■□□□ 1.6
DDX39A-215ENST00000590696 LRRC2Q9BYS8 371 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 OSBPL7Q9BZF2 842 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 LMCD1Q9NZU5 365 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 INSL6Q9Y581 213 aa25.03■■□□□ 1.6
DDX39A-215ENST00000590696 hCG_1642624A0A1W2PR95 340 aa25.02■■□□□ 1.6
DDX39A-215ENST00000590696 CAND2O75155 1236 aa25.02■■□□□ 1.6
DDX39A-215ENST00000590696 SEPT8Q92599 483 aa25.02■■□□□ 1.6
DDX39A-215ENST00000590696 HLA-CQ95604 372 aa25.02■■□□□ 1.6
DDX39A-215ENST00000590696 SLC12A7Q9Y666 1083 aa25.02■■□□□ 1.6
DDX39A-215ENST00000590696 ATP9AO75110 1047 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms