RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 NFASCO94856 1347 aa21.31■■□□□ 1
MBD1-223ENST00000590215 TNRC18O15417 2968 aaPredicted RBP21.31■■□□□ 1
MBD1-223ENST00000590215 DNAH12Q6ZR08 3092 aa21.31■■□□□ 1
MBD1-223ENST00000590215 PPFIA4O75335 1185 aa21.31■■□□□ 1
MBD1-223ENST00000590215 GJB2P29033 226 aa21.31■■□□□ 1
MBD1-223ENST00000590215 FOSBP53539 338 aa21.31■■□□□ 1
MBD1-223ENST00000590215 SAFBQ15424 915 aaKnown RBP eCLIP21.31■■□□□ 1
MBD1-223ENST00000590215 DGKDQ16760 1214 aa21.31■■□□□ 1
MBD1-223ENST00000590215 INF2Q27J81 1249 aa21.31■■□□□ 1
MBD1-223ENST00000590215 EARS2Q5JPH6 523 aaKnown RBP21.31■■□□□ 1
MBD1-223ENST00000590215 PIK3AP1Q6ZUJ8 805 aa21.31■■□□□ 1
MBD1-223ENST00000590215 SLC43A3Q8NBI5 491 aa21.31■■□□□ 1
MBD1-223ENST00000590215 INTS4Q96HW7 963 aaKnown RBP21.31■■□□□ 1
MBD1-223ENST00000590215 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
MBD1-223ENST00000590215 ITGB3BPQ13352 177 aaPredicted RBP21.3■■□□□ 1
MBD1-223ENST00000590215 Q4G0T1 1027 aa21.3■■□□□ 1
MBD1-223ENST00000590215 PPP4R3AQ6IN85 833 aa21.3■■□□□ 1
MBD1-223ENST00000590215 MTG1Q9BT17 334 aaPredicted RBP21.3■■□□□ 1
MBD1-223ENST00000590215 SEZ6LQ9BYH1 1024 aa21.3■■□□□ 1
MBD1-223ENST00000590215 FOXP1Q9H334 677 aaPredicted RBP21.3■■□□□ 1
MBD1-223ENST00000590215 SCN10AQ9Y5Y9 1956 aa21.3■■□□□ 1
MBD1-223ENST00000590215 A0A0U1RQG5 324 aaPredicted RBP21.29■■□□□ 1
MBD1-223ENST00000590215 DHX15O43143 795 aaKnown RBP21.29■■□□□ 1
MBD1-223ENST00000590215 MYL3P08590 195 aa21.29■■□□□ 1
MBD1-223ENST00000590215 CDK7P50613 346 aa21.29■■□□□ 1
MBD1-223ENST00000590215 ATN1P54259 1190 aaPredicted RBP21.29■■□□□ 1
MBD1-223ENST00000590215 GUCY1B3Q02153 619 aa21.29■■□□□ 1
MBD1-223ENST00000590215 PRR16Q569H4 304 aa21.29■■□□□ 1
MBD1-223ENST00000590215 NEK8Q86SG6 692 aa21.29■■□□□ 1
MBD1-223ENST00000590215 GPR20Q99678 358 aa21.29■■□□□ 1
MBD1-223ENST00000590215 ALPK3Q96L96 1907 aa21.29■■□□□ 1
MBD1-223ENST00000590215 GRIN2DO15399 1336 aa21.29■■□□□ 1
MBD1-223ENST00000590215 FAM205CA6NFA0 338 aa21.28■■□□□ 1
MBD1-223ENST00000590215 IPO5O00410 1097 aaKnown RBP21.28■■□□□ 1
MBD1-223ENST00000590215 SORBS3O60504 671 aa21.28■■□□□ 1
MBD1-223ENST00000590215 KAT2BQ92831 832 aa21.28■■□□□ 1
MBD1-223ENST00000590215 NAP1L4Q99733 375 aaKnown RBP21.28■■□□□ 1
MBD1-223ENST00000590215 ARVCFO00192 962 aa21.27■■□□□ 1
MBD1-223ENST00000590215 MSH4O15457 936 aa21.27■■□□□ 1
MBD1-223ENST00000590215 TDP2O95551 362 aa21.27■■□□□ 1
MBD1-223ENST00000590215 F2P00734 622 aa21.27■■□□□ 1
MBD1-223ENST00000590215 GCFC2P16383 781 aaKnown RBP21.27■■□□□ 1
MBD1-223ENST00000590215 U2AF2P26368 475 aaKnown RBP eCLIP21.27■■□□□ 1
MBD1-223ENST00000590215 RTP1P59025 263 aa21.27■■□□□ 1
MBD1-223ENST00000590215 ITGA7Q13683 1181 aa21.27■■□□□ 1
MBD1-223ENST00000590215 LETM2Q2VYF4 491 aa21.27■■□□□ 1
MBD1-223ENST00000590215 ANKRD33Q7Z3H0 272 aa21.27■■□□□ 1
MBD1-223ENST00000590215 TOX2Q96NM4 488 aa21.27■■□□□ 1
MBD1-223ENST00000590215 SDF4Q9BRK5 362 aa21.27■■□□□ 1
MBD1-223ENST00000590215 ZNF577Q9BSK1 485 aa21.27■■□□□ 1
MBD1-223ENST00000590215 C16orf70Q9BSU1 422 aa21.27■■□□□ 1
MBD1-223ENST00000590215 JPH1Q9HDC5 661 aaPredicted RBP21.27■■□□□ 1
MBD1-223ENST00000590215 TBC1D22BQ9NU19 505 aa21.27■■□□□ 1
MBD1-223ENST00000590215 PKD2L1Q9P0L9 805 aa21.27■■□□□ 1
MBD1-223ENST00000590215 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
MBD1-223ENST00000590215 TELO2Q9Y4R8 837 aa21.27■■□□□ 1
MBD1-223ENST00000590215 CEP290O15078 2479 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 GSTTP1A0A1W2PQM5 241 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 HAS3O00219 553 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 NOP56O00567 594 aaKnown RBP21.26■□□□□ 0.99
MBD1-223ENST00000590215 HSCBQ8IWL3 235 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 SEPT1Q8WYJ6 367 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 DPF3Q92784 378 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 VTI1AQ96AJ9 217 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 DOCK5Q9H7D0 1870 aa21.26■□□□□ 0.99
MBD1-223ENST00000590215 EVI5O60447 810 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 PSMC6P62333 389 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 TRIM60Q495X7 471 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 NOSTRINQ8IVI9 506 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 ETNPPLQ8TBG4 499 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 SLC5A5Q92911 643 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 RIT2Q99578 217 aa21.25■□□□□ 0.99
MBD1-223ENST00000590215 DDX25Q9UHL0 483 aaKnown RBP21.25■□□□□ 0.99
MBD1-223ENST00000590215 KIF28PB7ZC32 967 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 ATG7O95352 703 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 LGALS2P05162 132 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 TLE2Q04725 743 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 NBPF20Q3BBV1 942 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 LARP1BQ659C4 914 aaKnown RBP21.24■□□□□ 0.99
MBD1-223ENST00000590215 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 KATNAL1Q9BW62 490 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 KCNMB3Q9NPA1 279 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 MROH7Q68CQ1 1323 aa21.24■□□□□ 0.99
MBD1-223ENST00000590215 SLC37A4O43826 429 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 CCNT1O60563 726 aaKnown RBP21.23■□□□□ 0.99
MBD1-223ENST00000590215 LGR5O75473 907 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 CCNE2O96020 404 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 ZNF286BP0CG31 522 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 ACTR2P61160 394 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 SP4Q02446 784 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 PTPN11Q06124 597 aaPredicted RBP21.23■□□□□ 0.99
MBD1-223ENST00000590215 SESTD1Q86VW0 696 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 ATP11BQ9Y2G3 1177 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 NR2E3Q9Y5X4 410 aa21.23■□□□□ 0.99
MBD1-223ENST00000590215 H3BRB1 525 aa21.22■□□□□ 0.99
MBD1-223ENST00000590215 TBX3O15119 743 aa21.22■□□□□ 0.99
MBD1-223ENST00000590215 PSMD10O75832 226 aa21.22■□□□□ 0.99
MBD1-223ENST00000590215 TCF7P36402 384 aaPredicted RBP21.22■□□□□ 0.99
MBD1-223ENST00000590215 TRAPPC10P48553 1259 aa21.22■□□□□ 0.99
MBD1-223ENST00000590215 PSEN2P49810 448 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms