RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CTSBP07858 339 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 ERCC3P19447 782 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 ITGB8P26012 769 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 GYG1P46976 350 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 RIPK4P57078 832 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 FAM83AQ86UY5 434 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
SMAD4-209ENST00000589941 MPHOSPH8Q99549 860 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-209ENST00000589941 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 PDLIM7Q9NR12 457 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 LOC100289279A0A1B0GTE1 492 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 TRIM43BA6NCK2 446 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 CXCL11O14625 94 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 GIPC1O14908 333 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 NEFMP07197 916 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 HOXB7P09629 217 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 NFIAQ12857 509 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 DUSP27Q5VZP5 1158 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 APOBEC3HQ6NTF7 200 aaKnown RBP9.76□□□□□ -0.85
SMAD4-209ENST00000589941 Q6ZS46 218 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 TDRD7Q8NHU6 1098 aaKnown RBP9.76□□□□□ -0.85
SMAD4-209ENST00000589941 TRIM43Q96BQ3 446 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-209ENST00000589941 P2RX7Q99572 595 aaKnown RBP9.76□□□□□ -0.85
SMAD4-209ENST00000589941 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 MAP3K2Q9Y2U5 619 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 SLC45A1Q9Y2W3 748 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
SMAD4-209ENST00000589941 ZHX2Q9Y6X8 837 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 ZNF318Q5VUA4 2279 aa9.76□□□□□ -0.85
SMAD4-209ENST00000589941 TRIM75PA6NK02 468 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 USP17L7P0C7H9 530 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
SMAD4-209ENST00000589941 GSTT1P30711 240 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 TCP10Q12799 353 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 TRIM60Q495X7 471 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 AFG3L2Q9Y4W6 797 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 C5orf42Q9H799 3197 aa9.75□□□□□ -0.85
SMAD4-209ENST00000589941 CASP7P55210 303 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 CHAF1AQ13111 956 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-209ENST00000589941 FASTKD5Q7L8L6 764 aaKnown RBP9.74□□□□□ -0.85
SMAD4-209ENST00000589941 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 TIFAQ96CG3 184 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 FRMD6Q96NE9 622 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-209ENST00000589941 RUSC1Q9BVN2 902 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 FAM8A1Q9UBU6 413 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 GPN3Q9UHW5 284 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-209ENST00000589941 AGTPBP1Q9UPW5 1226 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 AK5Q9Y6K8 562 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 TRIOO75962 3097 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
SMAD4-209ENST00000589941 SPTBN4Q9H254 2564 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 PRRC2BQ5JSZ5 2229 aaKnown RBP9.73□□□□□ -0.85
SMAD4-209ENST00000589941 GRXCR1A8MXD5 290 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 PLIN1O60240 522 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 FBXO24O75426 580 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 GLB1P16278 677 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 ZKSCAN1P17029 563 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-209ENST00000589941 MAOBP27338 520 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 DAB2P98082 770 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 NHLH1Q02575 133 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 FKBP1CQ5VVH2 108 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 SCYL3Q8IZE3 742 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 TEKT1Q969V4 418 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 HOOK2Q96ED9 719 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 TMOD2Q9NZR1 351 aa9.73□□□□□ -0.85
SMAD4-209ENST00000589941 ZNF236Q9UL36 1845 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 CSF1RP07333 972 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 FURINP09958 794 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 EIF4BP23588 611 aaKnown RBP9.72□□□□□ -0.85
SMAD4-209ENST00000589941 TMPOP42166 694 aaKnown RBP9.72□□□□□ -0.85
SMAD4-209ENST00000589941 FGD1P98174 961 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 POU4F3Q15319 338 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 STK35Q8TDR2 534 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 FAM151AQ8WW52 585 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 USP6NLQ92738 828 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 TP53INP1Q96A56 240 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-209ENST00000589941 PLA2G12BQ9BX93 195 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 FLRT1Q9NZU1 646 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 RFX7Q2KHR2 1363 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
SMAD4-209ENST00000589941 BRWD1Q9NSI6 2320 aa9.71□□□□□ -0.85
SMAD4-209ENST00000589941 CYP11A1P05108 521 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 SNX17Q15036 470 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 RSPO4Q2I0M5 234 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-209ENST00000589941 GJC2Q5T442 439 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-209ENST00000589941 TMPRSS13Q9BYE2 586 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 TXNRD2Q9NNW7 524 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 CD320Q9NPF0 282 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.86
SMAD4-209ENST00000589941 SMCHD1A6NHR9 2005 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms