RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	SENP7	Q9BQF6	1050 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	AGO4	Q9HCK5	861 aa	Known RBP	13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	STARD7	Q9NQZ5	370 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	DOCK5	Q9H7D0	1870 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	DDX39A	O00148	427 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	RTP1	P59025	263 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	PURA	Q00577	322 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	ITGB3BP	Q13352	177 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	SAFB	Q15424	915 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	METTL7B	Q6UX53	244 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	NIPA1	Q7RTP0	329 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	PPTC7	Q8NI37	304 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	GJA10	Q969M2	543 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	POLR3E	Q9NVU0	708 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	PCDH10	Q9P2E7	1040 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	ATP11B	Q9Y2G3	1177 aa		13.55	□□□□□ -0.24
RFX2-215	ENST00000589742	KIF28P	B7ZC32	967 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	NOP56	O00567	594 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	EVI5	O60447	810 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	DGKD	Q16760	1214 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	TRIM60	Q495X7	471 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	UTP14C	Q5TAP6	766 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	NEK8	Q86SG6	692 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	HSCB	Q8IWL3	235 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	LENG9	Q96B70	501 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	GPR20	Q99678	358 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	ZNF577	Q9BSK1	485 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	MTG1	Q9BT17	334 aa	Predicted RBP	13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	PDE4DIP	Q5VU43	2346 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	GRIN2D	O15399	1336 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	ELP1	O95163	1332 aa		13.54	□□□□□ -0.24
RFX2-215	ENST00000589742	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	GSTTP1	A0A1W2PQM5	241 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	ARVCF	O00192	962 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	WNT7A	O00755	349 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	MSH4	O15457	936 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	DHX15	O43143	795 aa	Known RBP	13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	KPNA6	O60684	536 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	PPFIA4	O75335	1185 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	CABYR	O75952	493 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	ZNF286B	P0CG31	522 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	ATP2B1	P20020	1258 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	CYP3A7	P24462	503 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	ITGA7	Q13683	1181 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	LARP1B	Q659C4	914 aa	Known RBP	13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	C7orf61	Q8IZ16	206 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	KAT2B	Q92831	832 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	SDF4	Q9BRK5	362 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	DDX25	Q9UHL0	483 aa	Known RBP	13.53	□□□□□ -0.24
RFX2-215	ENST00000589742	KIF3A	Q9Y496	699 aa		13.53	□□□□□ -0.24
RFX2-215	ENST00000589742		A0A0U1RQG5	324 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742		H3BQV1	296 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	IPO5	O00410	1097 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SLC37A4	O43826	429 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	CCNT1	O60563	726 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	PQBP1	O60828	265 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	CDK7	P50613	346 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SET	Q01105	290 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	TLE2	Q04725	743 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	GNL2	Q13823	731 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SNX17	Q15036	470 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	NBPF20	Q3BBV1	942 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742		Q4G0T1	1027 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	MCTP1	Q6DN14	999 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SPRYD3	Q8NCJ5	442 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SEPT1	Q8WYJ6	367 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	MBOAT7	Q96N66	472 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	FOXP1	Q9H334	677 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	JPH1	Q9HDC5	661 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	SLC9A2	Q9UBY0	812 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	NFASC	O94856	1347 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	ALPK3	Q96L96	1907 aa		13.52	□□□□□ -0.25
RFX2-215	ENST00000589742	CCNE2	O96020	404 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	LGALS2	P05162	132 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	HOXD8	P13378	290 aa	Predicted RBP	13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	SYN1	P17600	705 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	TCF7	P36402	384 aa	Predicted RBP	13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	PSEN2	P49810	448 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	ACTR2	P61160	394 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	FAM47C	Q5HY64	1035 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	MOXD1	Q6UVY6	613 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	TRIM50	Q86XT4	487 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	C16orf70	Q9BSU1	422 aa		13.51	□□□□□ -0.25
RFX2-215	ENST00000589742	MFSD10	Q14728	455 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	ZNF174	Q15697	407 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	KIAA0753	Q2KHM9	967 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	C1orf53	Q5VUE5	145 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	PPP4R3A	Q6IN85	833 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	SH3RF1	Q7Z6J0	888 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	POTED	Q86YR6	584 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	NOSTRIN	Q8IVI9	506 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	SLC43A3	Q8NBI5	491 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	SLC5A5	Q92911	643 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	INTS4	Q96HW7	963 aa	Known RBP	13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	PCYT2	Q99447	389 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	TBC1D22B	Q9NU19	505 aa		13.5	□□□□□ -0.25
RFX2-215	ENST00000589742	NR2E3	Q9Y5X4	410 aa		13.5	□□□□□ -0.25

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