RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 SMIM10L2AP0DMW4 78 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 SMIM10L2BP0DMW5 78 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
MBD1-218ENST00000589541 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
MBD1-218ENST00000589541 INPP4AQ96PE3 977 aaPredicted RBP13.63□□□□□ -0.23
MBD1-218ENST00000589541 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
MBD1-218ENST00000589541 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
MBD1-218ENST00000589541 EMSYQ7Z589 1322 aa13.63□□□□□ -0.23
MBD1-218ENST00000589541 SPATA31C2B4DYI2 1134 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 TREHO43280 583 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 STAM2O75886 525 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 ICAM3P32942 547 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 KIF5BP33176 963 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 SP4Q02446 784 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 NEDD9Q14511 834 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 METTL7BQ6UX53 244 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
MBD1-218ENST00000589541 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 SMARCC2Q8TAQ2 1214 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 CUL5Q93034 780 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 GPR20Q99678 358 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 USP26Q9BXU7 913 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 RNPEPQ9H4A4 650 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 SEC63Q9UGP8 760 aaKnown RBP13.62□□□□□ -0.23
MBD1-218ENST00000589541 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
MBD1-218ENST00000589541 LINC01553A4QN01 128 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 FIBPO43427 364 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 PRC1O43663 620 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 DDAH1O94760 285 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 CTSHP09668 335 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 HOXC8P31273 242 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 CASC1Q6TDU7 716 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 NFXL1Q6ZNB6 911 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 HLA-CQ95604 372 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
MBD1-218ENST00000589541 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 SETD4Q9NVD3 440 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 COG5Q9UP83 839 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 TELO2Q9Y4R8 837 aa13.61□□□□□ -0.23
MBD1-218ENST00000589541 MEIS2O14770 477 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 AMHP03971 560 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 ERVK-21P61565 698 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
MBD1-218ENST00000589541 PCNX4Q63HM2 1172 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
MBD1-218ENST00000589541 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 ZNF215Q9UL58 517 aaPredicted RBP13.6□□□□□ -0.23
MBD1-218ENST00000589541 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
MBD1-218ENST00000589541 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 PIK3CDO00329 1044 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 GNAT1P11488 350 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 RXRAP19793 462 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 COL9A1P20849 921 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 MCM5P33992 734 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
MBD1-218ENST00000589541 COL9A3Q14050 684 aaPredicted RBP13.59□□□□□ -0.23
MBD1-218ENST00000589541 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 XRRA1Q6P2D8 792 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
MBD1-218ENST00000589541 SEPT8Q92599 483 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 LMCD1Q9NZU5 365 aa13.59□□□□□ -0.23
MBD1-218ENST00000589541 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
MBD1-218ENST00000589541 hCG_1642624A0A1W2PR95 340 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 SH2B2O14492 632 aaPredicted RBP13.58□□□□□ -0.24
MBD1-218ENST00000589541 CAND2O75155 1236 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 GNAQP50148 359 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 TMTC2Q8N394 836 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 TMEM87BQ96K49 555 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 C17orf80Q9BSJ5 609 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 LSG1Q9H089 658 aaKnown RBP13.58□□□□□ -0.24
MBD1-218ENST00000589541 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.24
MBD1-218ENST00000589541 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
MBD1-218ENST00000589541 SLC27A2O14975 620 aa13.57□□□□□ -0.24
MBD1-218ENST00000589541 UPP2O95045 317 aa13.57□□□□□ -0.24
MBD1-218ENST00000589541 TCF7P36402 384 aaPredicted RBP13.57□□□□□ -0.24
MBD1-218ENST00000589541 HTRA4P83105 476 aaPredicted RBP13.57□□□□□ -0.24
MBD1-218ENST00000589541 UBE2SQ16763 222 aa13.57□□□□□ -0.24
MBD1-218ENST00000589541 GIMAP8Q8ND71 665 aaPredicted RBP13.57□□□□□ -0.24
MBD1-218ENST00000589541 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms