RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 LENG9Q96B70 501 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 SPATA33Q96N06 139 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 TSHZ2Q9NRE2 1034 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 TCEAL9Q9UHQ7 104 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 MTMR6Q9Y217 621 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 Q9Y3F1 56 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 IPO5O00410 1097 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 DNM1LO00429 736 aa25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 WNT7AO00755 349 aa25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 NEMFO60524 1076 aa25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 FARP2O94887 1054 aaPredicted RBP25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 LAMC2Q13753 1193 aa25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 BRDTQ58F21 947 aaPredicted RBP25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 DIS3LQ8TF46 1054 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 BCAS3Q9H6U6 928 aa25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 JPH1Q9HDC5 661 aaPredicted RBP25.43■■□□□ 1.66
R3HDM4-205ENST00000589445 CYP3A7-CYP3A51PA0A087WV96 503 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 MAFGO15525 162 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 MARCH6O60337 910 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 CYP3A7P24462 503 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 MCM7P33993 719 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 ITGB3BPQ13352 177 aaPredicted RBP25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 NBR1Q14596 966 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 Q4G0T1 1027 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 METTL7BQ6UX53 244 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 SENP7Q9BQF6 1050 aa25.42■■□□□ 1.66
R3HDM4-205ENST00000589445 MSH4O15457 936 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 MMP3P08254 477 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 MYL3P08590 195 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 MYSM1Q5VVJ2 828 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 PPP4R3AQ6IN85 833 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 BRAPQ7Z569 592 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 ANKLE1Q8NAG6 615 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 PPTC7Q8NI37 304 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 GJA10Q969M2 543 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 EMID1Q96A84 441 aaPredicted RBP25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 MBOAT7Q96N66 472 aa25.41■■□□□ 1.66
R3HDM4-205ENST00000589445 NFASCO94856 1347 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 CTAGE5O15320 804 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 ZEB2O60315 1214 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 GAS7O60861 476 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 CST5P28325 142 aaPredicted RBP25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 TRAPPC10P48553 1259 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 RESTQ13127 1097 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 HSDL1Q3SXM5 330 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 LRCH2Q5VUJ6 765 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 SLC9A2Q9UBY0 812 aa25.4■■□□□ 1.66
R3HDM4-205ENST00000589445 WDR81Q562E7 1941 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 MKI67P46013 3256 aaKnown RBP25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 ZNF286BP0CG31 522 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 PKP1Q13835 747 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 ZNF174Q15697 407 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 KCNA10Q16322 511 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 CALCRLQ16602 461 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 PCSK9Q8NBP7 692 aaKnown RBP25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 KLHDC9Q8NEP7 349 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 FERMT2Q96AC1 680 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 TEKT3Q9BXF9 490 aa25.39■■□□□ 1.66
R3HDM4-205ENST00000589445 CHMP2AO43633 222 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 ASGR1P07306 291 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 ACLYP53396 1101 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 CHMP4BP1P59074 171 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 RILPL1Q5EBL4 403 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 ETNPPLQ8TBG4 499 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 SLC5A5Q92911 643 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 TELO2Q9Y4R8 837 aa25.38■■□□□ 1.65
R3HDM4-205ENST00000589445 A6NJR5 290 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 ZSCAN22P10073 491 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 DGKDQ16760 1214 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 CXCL17Q6UXB2 119 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 PAWRQ96IZ0 340 aaKnown RBP25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 TBC1D22BQ9NU19 505 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 POLR3EQ9NVU0 708 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 RBM19Q9Y4C8 960 aaKnown RBP25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 PCDHB6Q9Y5E3 794 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 ELP1O95163 1332 aa25.37■■□□□ 1.65
R3HDM4-205ENST00000589445 A0A1W2PQ45 241 aaPredicted RBP25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 A0A1W2PQY0 241 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 MOXD2PA6NHM9 499 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 BAG4O95429 457 aaKnown RBP25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 CAPN2P17655 700 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 TOB1P50616 345 aaPredicted RBP25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 NKX3-2P78367 333 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 UTP14CQ5TAP6 766 aaKnown RBP25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 GPR20Q99678 358 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 TSEN34Q9BSV6 310 aaKnown RBP25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 C11orf49Q9H6J7 331 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 KCNMB3Q9NPA1 279 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 PHF24Q9UPV7 400 aa25.36■■□□□ 1.65
R3HDM4-205ENST00000589445 MYH9P35579 1960 aaKnown RBP25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 TCF7P36402 384 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 MNX1P50219 401 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 ACTR2P61160 394 aa25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 KRT76Q01546 638 aa25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 ORC2Q13416 577 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 CCSAPQ6IQ19 270 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 FAM173BQ6P4H8 233 aa25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 NECAB2Q7Z6G3 386 aa25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 TRIM50Q86XT4 487 aa25.35■■□□□ 1.65
R3HDM4-205ENST00000589445 VTI1AQ96AJ9 217 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms