RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NKX3-2P78367 333 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 PDIA5Q14554 519 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 LRCH2Q5VUJ6 765 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 LHX8Q68G74 356 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 AP5M1Q9H0R1 490 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 TMEM60Q9H2L4 133 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 SPC25Q9HBM1 224 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 PAK6Q9NQU5 681 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 CLIC4Q9Y696 253 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 GAS7O60861 476 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 YEATS4O95619 227 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 TXKP42681 527 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 GJA9P57773 515 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 KRT85P78386 507 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 KRT76Q01546 638 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 ARHGAP1Q07960 439 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 PTPAQ15257 358 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 TEKT3Q9BXF9 490 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 RNF208Q9H0X6 261 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 UPF3AQ9H1J1 476 aaKnown RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 JPH1Q9HDC5 661 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-218ENST00000589294 SLC9A2Q9UBY0 812 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
DNMT1-218ENST00000589294 A6NJR5 290 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 ADCY6O43306 1168 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 PPFIA4O75335 1185 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■□ 20.3
DNMT1-218ENST00000589294 CEBPZQ03701 1054 aaKnown RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 STK38Q15208 465 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 MTFR1Q15390 333 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 BRDTQ58F21 947 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 TLK2Q86UE8 772 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 SMAP1Q8IYB5 467 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-218ENST00000589294 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 OR6J1Q8NGC5 347 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 COPS5Q92905 334 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 LRRC37A2A6NM11 1700 aa13.73□□□□□ -0.21
DNMT1-218ENST00000589294 SPTLC2O15270 562 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 KPNA6O60684 536 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 PPP6R2O75170 966 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 ATG7O95352 703 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 GJB1P08034 283 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 SFNP31947 248 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 CPT1AP50416 773 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 TMEM266Q2M3C6 531 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-218ENST00000589294 ARRDC4Q8NCT1 418 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
DNMT1-218ENST00000589294 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
DNMT1-218ENST00000589294 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
DNMT1-218ENST00000589294 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
DNMT1-218ENST00000589294 CENPFP49454 3210 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 WDR64B1ANS9 1081 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
DNMT1-218ENST00000589294 ZEB2O60315 1214 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 SGPL1O95470 568 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-218ENST00000589294 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
DNMT1-218ENST00000589294 CST5P28325 142 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-218ENST00000589294 TECP42680 631 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 JAK3P52333 1124 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 ACTR2P61160 394 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 IL17AQ16552 155 aa13.71□□□□□ -0.21
DNMT1-218ENST00000589294 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
DNMT1-218ENST00000589294 DGKDQ16760 1214 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms