RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TRIP12Q14669 1992 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-208ENST00000588692 H3BRB1 525 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 LGALS2P05162 132 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 ITGB5P18084 799 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 MTMR1Q13613 665 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-208ENST00000588692 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-208ENST00000588692 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 GPR20Q99678 358 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
DDX39A-208ENST00000588692 UBIAD1Q9Y5Z9 338 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 PARNO95453 639 aaKnown RBP16.54■□□□□ 0.24
DDX39A-208ENST00000588692 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 SCG2P13521 617 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 DNAJB2P25686 324 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 PTK7Q13308 1070 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 OTOP2Q7RTS6 562 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 GUCD1Q96NT3 240 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 BCAS3Q9H6U6 928 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 JADE2Q9NQC1 790 aa16.54■□□□□ 0.24
DDX39A-208ENST00000588692 ZNF215Q9UL58 517 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-208ENST00000588692 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
DDX39A-208ENST00000588692 ACTN1P12814 892 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 SELPP16109 830 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 KCNA2P16389 499 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-208ENST00000588692 ANO3Q9BYT9 981 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 SEMA6BQ9H3T3 888 aa16.53■□□□□ 0.24
DDX39A-208ENST00000588692 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-208ENST00000588692 GBF1Q92538 1859 aa16.52■□□□□ 0.24
DDX39A-208ENST00000588692 HOXC8P31273 242 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.23
DDX39A-208ENST00000588692 AKAP17AQ02040 695 aaKnown RBP16.52■□□□□ 0.23
DDX39A-208ENST00000588692 RAB30Q15771 203 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 LRRC8DQ7L1W4 858 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 DEFB128Q7Z7B8 93 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 DHX38Q92620 1227 aaKnown RBP16.52■□□□□ 0.23
DDX39A-208ENST00000588692 FAM161BQ96MY7 647 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 TTYH1Q9H313 450 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-208ENST00000588692 SLC4A7Q9Y6M7 1214 aa16.52■□□□□ 0.23
DDX39A-208ENST00000588692 COL6A3P12111 3177 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 C17orf102A2RUQ5 167 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
DDX39A-208ENST00000588692 ATP9AO75110 1047 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 IFNAR1P17181 557 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 PDIA3P30101 505 aaKnown RBP16.51■□□□□ 0.23
DDX39A-208ENST00000588692 SREBF1P36956 1147 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 TOB2Q14106 344 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-208ENST00000588692 NTRK3Q16288 839 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 MXRA8Q9BRK3 442 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 PBX4Q9BYU1 374 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 C6orf50Q9HD87 102 aa16.51■□□□□ 0.23
DDX39A-208ENST00000588692 ZBBXA8MT70 800 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 SMIM10L2AP0DMW4 78 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 SMIM10L2BP0DMW5 78 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 CKBP12277 381 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 SP4Q02446 784 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 PKN1Q16512 942 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 CEP55Q53EZ4 464 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 KCNH7Q9NS40 1196 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
DDX39A-208ENST00000588692 BAIAP3O94812 1187 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 GNAT1P11488 350 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 GNA11P29992 359 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 TCF7P36402 384 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 TRIM71Q2Q1W2 868 aaKnown RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 UTP14CQ5TAP6 766 aaKnown RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 REXO1Q8N1G1 1221 aaKnown RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 SEPT1Q8WYJ6 367 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 PHKBQ93100 1093 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 PGBD1Q96JS3 809 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 JPH1Q9HDC5 661 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-208ENST00000588692 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 KAT6AQ92794 2004 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 NFASCO94856 1347 aa16.49■□□□□ 0.23
DDX39A-208ENST00000588692 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 CAND2O75155 1236 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ANAPC15P60006 121 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-208ENST00000588692 HIC1Q14526 733 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
DDX39A-208ENST00000588692 TRIM22Q8IYM9 498 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms