RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ZBBXA8MT70 800 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 H3BRB1 525 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 MAFGO15525 162 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 PRPF3O43395 683 aaKnown RBP22.37■■□□□ 1.17
TPM4-208ENST00000588410 IQCF3P0C7M6 154 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 PDIA3P30101 505 aaKnown RBP22.37■■□□□ 1.17
TPM4-208ENST00000588410 AP3B2Q13367 1082 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 UTP14CQ5TAP6 766 aaKnown RBP22.37■■□□□ 1.17
TPM4-208ENST00000588410 AFAP1L1Q8TED9 768 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 PGBD1Q96JS3 809 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 ANO3Q9BYT9 981 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 TM6SF1Q9BZW5 370 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 FTOQ9C0B1 505 aaKnown RBP eCLIP22.37■■□□□ 1.17
TPM4-208ENST00000588410 TUT1Q9H6E5 874 aaKnown RBP22.37■■□□□ 1.17
TPM4-208ENST00000588410 JADE2Q9NQC1 790 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 PKD2L1Q9P0L9 805 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 ZNF215Q9UL58 517 aaPredicted RBP22.37■■□□□ 1.17
TPM4-208ENST00000588410 NID2Q14112 1375 aa22.37■■□□□ 1.17
TPM4-208ENST00000588410 ACTN1P12814 892 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 CCT2P78371 535 aaKnown RBP22.36■■□□□ 1.17
TPM4-208ENST00000588410 PTK7Q13308 1070 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 UPF3BQ9BZI7 483 aaKnown RBP22.36■■□□□ 1.17
TPM4-208ENST00000588410 SEMA6BQ9H3T3 888 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 C6orf50Q9HD87 102 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 CXXC1Q9P0U4 656 aaPredicted RBP22.36■■□□□ 1.17
TPM4-208ENST00000588410 STXBP5LQ9Y2K9 1186 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 SLC4A7Q9Y6M7 1214 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 SZT2Q5T011 3432 aa22.36■■□□□ 1.17
TPM4-208ENST00000588410 TMEM265A0A087WTH1 108 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 C17orf102A2RUQ5 167 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 SELPP16109 830 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 DNAJB2P25686 324 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 EVCP57679 992 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 PHKBQ93100 1093 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 TIFAQ96CG3 184 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 MXRA8Q9BRK3 442 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 SLC26A6Q9BXS9 759 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 PDRG1Q9NUG6 133 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 TMEM260Q9NX78 707 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 SCN10AQ9Y5Y9 1956 aa22.35■■□□□ 1.17
TPM4-208ENST00000588410 GRXCR1A8MXD5 290 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 ATP9AO75110 1047 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 SMIM10L2AP0DMW4 78 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 SMIM10L2BP0DMW5 78 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 KCNA2P16389 499 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 ZNF76P36508 570 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 ZNF200P98182 395 aaPredicted RBP22.34■■□□□ 1.17
TPM4-208ENST00000588410 TOB2Q14106 344 aaPredicted RBP22.34■■□□□ 1.17
TPM4-208ENST00000588410 MCTP2Q6DN12 878 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 LRRC8DQ7L1W4 858 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 DHX38Q92620 1227 aaKnown RBP22.34■■□□□ 1.17
TPM4-208ENST00000588410 GUCD1Q96NT3 240 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 RNF26Q9BY78 433 aaPredicted RBP22.34■■□□□ 1.17
TPM4-208ENST00000588410 NCOA5Q9HCD5 579 aaKnown RBP22.34■■□□□ 1.17
TPM4-208ENST00000588410 MSRAQ9UJ68 235 aa22.34■■□□□ 1.17
TPM4-208ENST00000588410 ESYT2A0FGR8 921 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 CPLX1O14810 134 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
TPM4-208ENST00000588410 PPFIA3O75145 1194 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 PARNO95453 639 aaKnown RBP22.33■■□□□ 1.17
TPM4-208ENST00000588410 IFNAR1P17181 557 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 GNA11P29992 359 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 RAB30Q15771 203 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 JAKMIP3Q5VZ66 844 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 SEPT1Q8WYJ6 367 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 ATP6V0A1Q93050 837 aa22.33■■□□□ 1.17
TPM4-208ENST00000588410 TTYH1Q9H313 450 aaPredicted RBP22.33■■□□□ 1.17
TPM4-208ENST00000588410 KIAA1217Q5T5P2 1943 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 GNAT1P11488 350 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 CKBP12277 381 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 TCF7P36402 384 aaPredicted RBP22.32■■□□□ 1.16
TPM4-208ENST00000588410 SREBF1P36956 1147 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 CLK2P49760 499 aaKnown RBP22.32■■□□□ 1.16
TPM4-208ENST00000588410 RBL2Q08999 1139 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 NTRK3Q16288 839 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 PKN1Q16512 942 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 CEP55Q53EZ4 464 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 TRIM50Q86XT4 487 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 CCDC148Q8NFR7 591 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 ZNF274Q96GC6 653 aaPredicted RBP22.32■■□□□ 1.16
TPM4-208ENST00000588410 SDF4Q9BRK5 362 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 PBX4Q9BYU1 374 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 ZMYND12Q9H0C1 365 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 KCNH7Q9NS40 1196 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 TELO2Q9Y4R8 837 aa22.32■■□□□ 1.16
TPM4-208ENST00000588410 ARHGAP4P98171 946 aa22.31■■□□□ 1.16
TPM4-208ENST00000588410 CPLX2Q6PUV4 134 aaKnown RBP22.31■■□□□ 1.16
TPM4-208ENST00000588410 REXO1Q8N1G1 1221 aaKnown RBP22.31■■□□□ 1.16
TPM4-208ENST00000588410 BICD2Q8TD16 824 aa22.31■■□□□ 1.16
TPM4-208ENST00000588410 VWCEQ96DN2 955 aa22.31■■□□□ 1.16
TPM4-208ENST00000588410 CDX2Q99626 313 aaPredicted RBP22.31■■□□□ 1.16
TPM4-208ENST00000588410 LARP6Q9BRS8 491 aaKnown RBP22.31■■□□□ 1.16
TPM4-208ENST00000588410 JPH1Q9HDC5 661 aaPredicted RBP22.31■■□□□ 1.16
TPM4-208ENST00000588410 ATP2A2P16615 1042 aaKnown RBP22.3■■□□□ 1.16
TPM4-208ENST00000588410 PBX2P40425 430 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 SSRP1Q08945 709 aaKnown RBP22.3■■□□□ 1.16
TPM4-208ENST00000588410 STK3Q13188 491 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 HIC1Q14526 733 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms