RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SMAP1Q8IYB5 467 aaPredicted RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 RDM1Q8NG50 284 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 LENG9Q96B70 501 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 SPATA33Q96N06 139 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 JPH1Q9HDC5 661 aaPredicted RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 SLC9A2Q9UBY0 812 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ATP6V1DQ9Y5K8 247 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 CENPFP49454 3210 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 MSH4O15457 936 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 GAS7O60861 476 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 FARP2O94887 1054 aaPredicted RBP10.25□□□□□ -0.77
CIRBP-218ENST00000588344 TDP2O95551 362 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 SFNP31947 248 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 SLC26A2P50443 739 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 NUCB2P80303 420 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 KCNA10Q16322 511 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 CALCRLQ16602 461 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 ANO1Q5XXA6 986 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
CIRBP-218ENST00000588344 NECAB2Q7Z6G3 386 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 ETNPPLQ8TBG4 499 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 AFG1LQ8WV93 481 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 SLC5A5Q92911 643 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 GLT1D1Q96MS3 346 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 KATNAL1Q9BW62 490 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 KCNMB3Q9NPA1 279 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 PCDHA12Q9UN75 941 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
CIRBP-218ENST00000588344 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 ZSWIM8A7E2V4 1837 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 ELP1O95163 1332 aa10.25□□□□□ -0.77
CIRBP-218ENST00000588344 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 WDR64B1ANS9 1081 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 KIF28PB7ZC32 967 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 CTAGE5O15320 804 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 DHX15O43143 795 aaKnown RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ADCY6O43306 1168 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 DKC1O60832 514 aaKnown RBP eCLIP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 PSMD10O75832 226 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ATG7O95352 703 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ASGR1P07306 291 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 HOXD8P13378 290 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 EN2P19622 333 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 MCM7P33993 719 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ACLYP53396 1101 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ITGB3BPQ13352 177 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 PDIA5Q14554 519 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ZNF174Q15697 407 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 HSDL1Q3SXM5 330 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 LRCH2Q5VUJ6 765 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 MIS18BP1Q6P0N0 1132 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 COPS5Q92905 334 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 ZNF396Q96N95 335 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 GPR20Q99678 358 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 MTG1Q9BT17 334 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-218ENST00000588344 TEKT3Q9BXF9 490 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 RAB34Q9BZG1 259 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 SMARCAD1Q9H4L7 1026 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 AZI2Q9H6S1 392 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 PCDHA10Q9Y5I2 948 aa10.24□□□□□ -0.77
CIRBP-218ENST00000588344 SMCHD1A6NHR9 2005 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 SLC37A4O43826 429 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 PSAPP07602 524 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 MMP3P08254 477 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 PRPHP41219 470 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 TOB1P50616 345 aaPredicted RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 JAK3P52333 1124 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 ACTR2P61160 394 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 RESTQ13127 1097 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 PPP2R5CQ13362 524 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 TMEM63BQ5T3F8 832 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 FAM160B1Q5W0V3 765 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 ARL6IP4Q66PJ3 421 aaKnown RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 PLPPR4Q7Z2D5 763 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 FERMT3Q86UX7 667 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 C11orf49Q9H6J7 331 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 ZNF215Q9UL58 517 aaPredicted RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 MORC2Q9Y6X9 1032 aaPredicted RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 MYH6P13533 1939 aa10.23□□□□□ -0.77
CIRBP-218ENST00000588344 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
CIRBP-218ENST00000588344 IGKV6D-21A0A0A0MT36 114 aa10.22□□□□□ -0.77
CIRBP-218ENST00000588344 H3BRB1 525 aa10.22□□□□□ -0.77
CIRBP-218ENST00000588344 BRD1O95696 1058 aa10.22□□□□□ -0.77
CIRBP-218ENST00000588344 F13A1P00488 732 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms