RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 USP17L6PQ6QN14 398 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 CYFIP1Q7L576 1253 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 TUT1Q9H6E5 874 aaKnown RBP19.52■□□□□ 0.72
TMED1-203ENST00000588259 BCAS3Q9H6U6 928 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 MTUS1Q9ULD2 1270 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 MTCH2Q9Y6C9 303 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 KAT6AQ92794 2004 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 EMSYQ7Z589 1322 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 EFCAB14O75071 495 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 LGR5O75473 907 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 GNAQP50148 359 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 TFF2Q03403 129 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 TCTN1Q2MV58 587 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
TMED1-203ENST00000588259 METTL7BQ6UX53 244 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 SPRED2Q7Z698 418 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 SERINC5Q86VE9 423 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 TRIM50Q86XT4 487 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 CMTR1Q8N1G2 835 aaKnown RBP19.51■□□□□ 0.71
TMED1-203ENST00000588259 INPP4AQ96PE3 977 aaPredicted RBP19.51■□□□□ 0.71
TMED1-203ENST00000588259 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 LZTS2Q9BRK4 669 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 ANO2Q9NQ90 1003 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 ZNF215Q9UL58 517 aaPredicted RBP19.51■□□□□ 0.71
TMED1-203ENST00000588259 MICAL3Q7RTP6 2002 aa19.51■□□□□ 0.71
TMED1-203ENST00000588259 RSPH10B2B2RC85 870 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 SPATA31C2B4DYI2 1134 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 SH2B2O14492 632 aaPredicted RBP19.5■□□□□ 0.71
TMED1-203ENST00000588259 SLC27A2O14975 620 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 CTSHP09668 335 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 RSPH10BP0C881 870 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 MBTPS1Q14703 1052 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 TMTC2Q8N394 836 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 GDPD5Q8WTR4 605 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 TMEM87BQ96K49 555 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 UHRF1Q96T88 793 aaPredicted RBP19.5■□□□□ 0.71
TMED1-203ENST00000588259 ESYT1Q9BSJ8 1104 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 USP26Q9BXU7 913 aa19.5■□□□□ 0.71
TMED1-203ENST00000588259 LSG1Q9H089 658 aaKnown RBP19.5■□□□□ 0.71
TMED1-203ENST00000588259 hCG_1642624A0A1W2PR95 340 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 CALM1P0DP23 149 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 CALM2P0DP24 149 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 CALM3P0DP25 149 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 ICAM3P32942 547 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 SEMA3FQ13275 785 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 GRB10Q13322 594 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 AAK1Q2M2I8 961 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 PCNX4Q63HM2 1172 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 NLRX1Q86UT6 975 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 MYOCDQ8IZQ8 938 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 CCDC82Q8N4S0 544 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 SRBD1Q8N5C6 995 aaKnown RBP19.49■□□□□ 0.71
TMED1-203ENST00000588259 GPR20Q99678 358 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 SLC12A7Q9Y666 1083 aa19.49■□□□□ 0.71
TMED1-203ENST00000588259 SPTBN5Q9NRC6 3674 aaKnown RBP19.49■□□□□ 0.71
TMED1-203ENST00000588259 REV3LO60673 3130 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 TREHO43280 583 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 GJB5O95377 273 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 AMHP03971 560 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 GNAT1P11488 350 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 CREB3L3Q68CJ9 461 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 MICU3Q86XE3 530 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 RAD9AQ99638 391 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 MTA3Q9BTC8 594 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 PSTPIP2Q9H939 334 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 SETD4Q9NVD3 440 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 PKD2L1Q9P0L9 805 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 SIP14410 1827 aa19.48■□□□□ 0.71
TMED1-203ENST00000588259 PIK3CDO00329 1044 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 MEIS2O14770 477 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 SMARCA1P28370 1054 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 ARHGAP4P98171 946 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 UBE2SQ16763 222 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 XRRA1Q6P2D8 792 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.47■□□□□ 0.71
TMED1-203ENST00000588259 HEATR3Q7Z4Q2 680 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 DBF4BQ8NFT6 615 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 NECAB3Q96P71 396 aaPredicted RBP19.47■□□□□ 0.71
TMED1-203ENST00000588259 RNPEPQ9H4A4 650 aa19.47■□□□□ 0.71
TMED1-203ENST00000588259 SPDYE3A6NKU9 549 aa19.46■□□□□ 0.71
TMED1-203ENST00000588259 POU3F3P20264 500 aaPredicted RBP19.46■□□□□ 0.71
TMED1-203ENST00000588259 KCNQ1P51787 676 aa19.46■□□□□ 0.71
TMED1-203ENST00000588259 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
TMED1-203ENST00000588259 SYNE3Q6ZMZ3 975 aa19.46■□□□□ 0.71
TMED1-203ENST00000588259 GIMAP8Q8ND71 665 aaPredicted RBP19.46■□□□□ 0.71
TMED1-203ENST00000588259 SEPT8Q92599 483 aa19.46■□□□□ 0.71
TMED1-203ENST00000588259 TGS1Q96RS0 853 aaKnown RBP19.46■□□□□ 0.71
TMED1-203ENST00000588259 TELO2Q9Y4R8 837 aa19.46■□□□□ 0.71
TMED1-203ENST00000588259 LINC01553A4QN01 128 aa19.45■□□□□ 0.7
TMED1-203ENST00000588259 LIFRP42702 1097 aa19.45■□□□□ 0.7
TMED1-203ENST00000588259 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
TMED1-203ENST00000588259 BDP1A6H8Y1 2624 aa19.45■□□□□ 0.7
TMED1-203ENST00000588259 BRWD1Q9NSI6 2320 aa19.45■□□□□ 0.7
TMED1-203ENST00000588259 MARK3P27448 753 aa19.44■□□□□ 0.7
TMED1-203ENST00000588259 HOXC8P31273 242 aa19.44■□□□□ 0.7
TMED1-203ENST00000588259 TCF7P36402 384 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms