RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SUGT1Q9Y2Z0 365 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 PCDHGC5Q9Y5F6 944 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 EBAG9O00559 213 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 MARCH6O60337 910 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 TDP2O95551 362 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 IRAK1P51617 712 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 NAP1L1P55209 391 aaKnown RBP20.48■□□□□ 0.87
DDX39A-206ENST00000587730 RHBDL3P58872 404 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 RASSF7Q02833 373 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 SLC18A3Q16572 532 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 WHAMMQ8TF30 809 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 DNAJC19Q96DA6 116 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 DRC1Q96MC2 740 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 TRIM34Q9BYJ4 488 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 AIPL1Q9NZN9 384 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDX39A-206ENST00000587730 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
DDX39A-206ENST00000587730 EIF3HO15372 352 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDX39A-206ENST00000587730 SLC1A4P43007 532 aa20.47■□□□□ 0.87
DDX39A-206ENST00000587730 TNNC1P63316 161 aa20.47■□□□□ 0.87
DDX39A-206ENST00000587730 GFPT1Q06210 699 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-206ENST00000587730 TRIM59Q8IWR1 403 aa20.47■□□□□ 0.87
DDX39A-206ENST00000587730 GSPT2Q8IYD1 628 aaKnown RBP20.47■□□□□ 0.87
DDX39A-206ENST00000587730 CPVLQ9H3G5 476 aa20.47■□□□□ 0.87
DDX39A-206ENST00000587730 ATXN2Q99700 1313 aaKnown RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 A0A087WUV0 522 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 CPP00450 1065 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 TNNI2P48788 182 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 CLK2P49760 499 aaKnown RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 KCNMA1Q12791 1236 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 FAM196AQ6ZSG2 479 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 CD302Q8IX05 232 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 CNBD1Q8NA66 436 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 BBXQ8WY36 941 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 MTMR8Q96EF0 704 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 POTEMA6NI47 508 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 TRIM66O15016 1216 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 TTLL1O95922 423 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 EPS15P42566 896 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 TTC31Q49AM3 519 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 EMC10Q5UCC4 262 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 RIN2Q8WYP3 895 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 GDAP1L1Q96MZ0 367 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 LSM14BQ9BX40 385 aaKnown RBP20.46■□□□□ 0.87
DDX39A-206ENST00000587730 UBA5Q9GZZ9 404 aa20.46■□□□□ 0.87
DDX39A-206ENST00000587730 ZEB2O60315 1214 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 ASIC2Q16515 512 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 MOXD1Q6UVY6 613 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 HDAC7Q8WUI4 952 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 TAF4BQ92750 862 aa20.45■□□□□ 0.86
DDX39A-206ENST00000587730 RBM12Q9NTZ6 932 aaKnown RBP20.45■□□□□ 0.86
DDX39A-206ENST00000587730 SRRM3A6NNA2 597 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-206ENST00000587730 CETN3O15182 167 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 UFL1O94874 794 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 USP11P51784 963 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 GRIK5Q16478 980 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 CFAP58Q5T655 872 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 MEI1Q5TIA1 1274 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 FOXR1Q6PIV2 292 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 B4GALNT4Q76KP1 1039 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 ARHGEF1Q92888 912 aaKnown RBP20.44■□□□□ 0.86
DDX39A-206ENST00000587730 MXD3Q9BW11 206 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 PLCB1Q9NQ66 1216 aa20.44■□□□□ 0.86
DDX39A-206ENST00000587730 NOL4O94818 638 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 TRIM37O94972 964 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 RFC4P35249 363 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 MATR3P43243 847 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX39A-206ENST00000587730 GABPAQ06546 454 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 KLHL30Q0D2K2 578 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
DDX39A-206ENST00000587730 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 SLFN12Q8IYM2 578 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 KCTD17Q8N5Z5 321 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 COA7Q96BR5 231 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 PBKQ96KB5 322 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 ZBTB5O15062 677 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 POLR2FP61218 127 aaKnown RBP20.43■□□□□ 0.86
DDX39A-206ENST00000587730 NFIXQ14938 502 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 JMJD4Q9H9V9 463 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 SALL4Q9UJQ4 1053 aa20.43■□□□□ 0.86
DDX39A-206ENST00000587730 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-206ENST00000587730 FRMD3A2A2Y4 597 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 NKRFO15226 690 aaKnown RBP eCLIP20.42■□□□□ 0.86
DDX39A-206ENST00000587730 PALMO75781 387 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 BBOX1O75936 387 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 GNGT1P63211 74 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 GPSM2P81274 684 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-206ENST00000587730 KCNK18Q7Z418 384 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 FRMD5Q7Z6J6 570 aa20.42■□□□□ 0.86
DDX39A-206ENST00000587730 HAS1Q92839 578 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms