RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TGS1Q96RS0 853 aaKnown RBP13.48□□□□□ -0.25
LIG3-207ENST00000586119 H3BRB1 525 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
LIG3-207ENST00000586119 LGALS2P05162 132 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 CTSHP09668 335 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 CCND2P30279 289 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 ANTXR2P58335 489 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 TROAPQ12815 778 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 TRIM50Q86XT4 487 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
LIG3-207ENST00000586119 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
LIG3-207ENST00000586119 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
LIG3-207ENST00000586119 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.46□□□□□ -0.25
LIG3-207ENST00000586119 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.46□□□□□ -0.25
LIG3-207ENST00000586119 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 E7EWF7 191 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 UPP2O95045 317 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 UTP14CQ5TAP6 766 aaKnown RBP13.46□□□□□ -0.25
LIG3-207ENST00000586119 KCNV1Q6PIU1 500 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.25
LIG3-207ENST00000586119 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
LIG3-207ENST00000586119 SPATA31C2B4DYI2 1134 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 TGFB3P10600 412 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 CHMLP26374 656 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 HOXC8P31273 242 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 HTRA4P83105 476 aaPredicted RBP13.45□□□□□ -0.26
LIG3-207ENST00000586119 SP4Q02446 784 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 WTAPQ15007 396 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
LIG3-207ENST00000586119 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 GPR20Q99678 358 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
LIG3-207ENST00000586119 INSL6Q9Y581 213 aa13.45□□□□□ -0.26
LIG3-207ENST00000586119 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 AMHP03971 560 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 IL9P15248 144 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 KCNA5P22460 613 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 ICAM3P32942 547 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 TRDNQ13061 729 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
LIG3-207ENST00000586119 C1QTNF1Q9BXJ1 281 aa13.44□□□□□ -0.26
LIG3-207ENST00000586119 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
LIG3-207ENST00000586119 ATG2AQ2TAZ0 1938 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
LIG3-207ENST00000586119 MEIS2O14770 477 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 EFCAB14O75071 495 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 ATP9AO75110 1047 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 ADAM17P78536 824 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
LIG3-207ENST00000586119 NCOA7Q8NI08 942 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
LIG3-207ENST00000586119 TOP1MTQ969P6 601 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
LIG3-207ENST00000586119 FRMPD4Q14CM0 1322 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 hCG_1642624A0A1W2PR95 340 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 CHRNA1P02708 482 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 RXRAP19793 462 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 PLA2G5P39877 138 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
LIG3-207ENST00000586119 ARHGAP4P98171 946 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 GPM6BQ13491 265 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 CATIPQ7Z7H3 387 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 SRBD1Q8N5C6 995 aaKnown RBP13.42□□□□□ -0.26
LIG3-207ENST00000586119 SEPT8Q92599 483 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 LOXHD1Q8IVV2 1947 aa13.42□□□□□ -0.26
LIG3-207ENST00000586119 ERICH2A1L162 156 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 H3BQ06 376 aaPredicted RBP13.41□□□□□ -0.26
LIG3-207ENST00000586119 SGSM2O43147 1006 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 NEFLP07196 543 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 NEDD9Q14511 834 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 LEXMQ3ZCV2 418 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 TCEAL5Q5H9L2 206 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 RALYLQ86SE5 291 aaKnown RBP13.41□□□□□ -0.26
LIG3-207ENST00000586119 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 TMEM192Q8IY95 271 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 MAP4K1Q92918 833 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 YME1L1Q96TA2 773 aa13.41□□□□□ -0.26
LIG3-207ENST00000586119 PKD2L1Q9P0L9 805 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms