RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 C7orf61Q8IZ16 206 aa13.71□□□□□ -0.21
CNN1-204ENST00000586059 GIMAP8Q8ND71 665 aaPredicted RBP13.71□□□□□ -0.21
CNN1-204ENST00000586059 MTG1Q9BT17 334 aaPredicted RBP13.71□□□□□ -0.21
CNN1-204ENST00000586059 KCNH7Q9NS40 1196 aa13.71□□□□□ -0.21
CNN1-204ENST00000586059 SMC3Q9UQE7 1217 aa13.71□□□□□ -0.21
CNN1-204ENST00000586059 ATP11BQ9Y2G3 1177 aa13.71□□□□□ -0.21
CNN1-204ENST00000586059 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.71□□□□□ -0.21
CNN1-204ENST00000586059 ELP1O95163 1332 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 MAFGO15525 162 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 KPNA6O60684 536 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 GJB2P29033 226 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 PSMC6P62333 389 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 DGKDQ16760 1214 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 PRR16Q569H4 304 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
CNN1-204ENST00000586059 AGO4Q9HCK5 861 aaKnown RBP13.7□□□□□ -0.22
CNN1-204ENST00000586059 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
CNN1-204ENST00000586059 EDIL3O43854 480 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 TDP2O95551 362 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 ZNF286BP0CG31 522 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 CIITAP33076 1130 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 USP11P51784 963 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 CUL4AQ13619 759 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
CNN1-204ENST00000586059 SNX17Q15036 470 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 LETM2Q2VYF4 491 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
CNN1-204ENST00000586059 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 FBXO18Q8NFZ0 1043 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 TNFRSF25Q93038 417 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 LTBP2Q14767 1821 aa13.69□□□□□ -0.22
CNN1-204ENST00000586059 NFASCO94856 1347 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
CNN1-204ENST00000586059 ARVCFO00192 962 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 PQBP1O60828 265 aaKnown RBP13.68□□□□□ -0.22
CNN1-204ENST00000586059 HOXD8P13378 290 aaPredicted RBP13.68□□□□□ -0.22
CNN1-204ENST00000586059 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
CNN1-204ENST00000586059 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 SNX21Q969T3 373 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 LENG9Q96B70 501 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 GPR20Q99678 358 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 ZNF577Q9BSK1 485 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 JPH1Q9HDC5 661 aaPredicted RBP13.68□□□□□ -0.22
CNN1-204ENST00000586059 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 TELO2Q9Y4R8 837 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 NR2E3Q9Y5X4 410 aa13.68□□□□□ -0.22
CNN1-204ENST00000586059 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
CNN1-204ENST00000586059 PPFIA4O75335 1185 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 LGALS2P05162 132 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 TLE2Q04725 743 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
CNN1-204ENST00000586059 C1orf53Q5VUE5 145 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
CNN1-204ENST00000586059 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
CNN1-204ENST00000586059 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
CNN1-204ENST00000586059 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 H3BQV1 296 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 MSH4O15457 936 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 SLC37A4O43826 429 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 F2P00734 622 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 CYP3A7P24462 503 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 TCF7P36402 384 aaPredicted RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 PSEN2P49810 448 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 MFSD10Q14728 455 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 Q4G0T1 1027 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 KAT2BQ92831 832 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
CNN1-204ENST00000586059 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
CNN1-204ENST00000586059 GSTTP1A0A1W2PQM5 241 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 DCDC2CA8MYV0 355 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 KIF28PB7ZC32 967 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 TLR3O15455 904 aaKnown RBP13.65□□□□□ -0.22
CNN1-204ENST00000586059 SYN1P17600 705 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 CDK7P50613 346 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 ACTR2P61160 394 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 LRCH2Q5VUJ6 765 aa13.65□□□□□ -0.22
CNN1-204ENST00000586059 MCTP1Q6DN14 999 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms