RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	FRMPD4	Q14CM0	1322 aa		18.91	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	LAMA4	Q16363	1823 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	TRANK1	O15050	2925 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	GBF1	Q92538	1859 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	LINC01553	A4QN01	128 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	STAM2	O75886	525 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	MKRN4P	Q13434	485 aa	Predicted RBP	18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	NEDD9	Q14511	834 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	GNPTAB	Q3T906	1256 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	USP17L6P	Q6QN14	398 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	METTL7B	Q6UX53	244 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	GPR20	Q99678	358 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	MYL10	Q9BUA6	226 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	SPZ1	Q9BXG8	430 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	USP26	Q9BXU7	913 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	OSBPL7	Q9BZF2	842 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	LY9	Q9HBG7	655 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	LMCD1	Q9NZU5	365 aa		18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	RBM8A	Q9Y5S9	174 aa	Known RBP	18.9	■□□□□ 0.62
PRKAR1A-206	ENST00000585460	MEIS2	O14770	477 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	COL9A1	P20849	921 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SMARCA1	P28370	1054 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	IRX6	P78412	446 aa	Predicted RBP	18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PLEKHG4	Q58EX7	1191 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	ZNF654	Q8IZM8	581 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	GDPD5	Q8WTR4	605 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	HLA-C	Q95604	372 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	TGS1	Q96RS0	853 aa	Known RBP	18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SETD4	Q9NVD3	440 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	MTUS1	Q9ULD2	1270 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	BDP1	A6H8Y1	2624 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	EMSY	Q7Z589	1322 aa		18.89	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	NOP56	O00567	594 aa	Known RBP	18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	FIBP	O43427	364 aa		18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	COL9A3	Q14050	684 aa	Predicted RBP	18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SRBD1	Q8N5C6	995 aa	Known RBP	18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	RRP36	Q96EU6	259 aa	Known RBP	18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	INSL6	Q9Y581	213 aa		18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	TRIP12	Q14669	1992 aa	Predicted RBP	18.88	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PIK3CD	O00329	1044 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PRC1	O43663	620 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	REV3L	O60673	3130 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	NCOR1	O75376	2440 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	ADAM17	P78536	824 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PCNX4	Q63HM2	1172 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	XRRA1	Q6P2D8	792 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CTCFL	Q8NI51	663 aa	Predicted RBP	18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SMARCC2	Q8TAQ2	1214 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SENP7	Q9BQF6	1050 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	LZTS2	Q9BRK4	669 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	MTA3	Q9BTC8	594 aa		18.87	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	KIAA1217	Q5T5P2	1943 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	DDAH1	O94760	285 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PLEKHA8P1	O95397	391 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	AMH	P03971	560 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	KIF5B	P33176	963 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	HTRA4	P83105	476 aa	Predicted RBP	18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	UTP14C	Q5TAP6	766 aa	Known RBP	18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	TRIM50	Q86XT4	487 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CMTR1	Q8N1G2	835 aa	Known RBP	18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	TMTC2	Q8N394	836 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CUL5	Q93034	780 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	XIRP2	A4UGR9	3374 aa		18.86	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	ATP9A	O75110	1047 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	GNAT1	P11488	350 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	GNAQ	P50148	359 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CASC1	Q6TDU7	716 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	MYOCD	Q8IZQ8	938 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SEPT8	Q92599	483 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	TOP1MT	Q969P6	601 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	C17orf80	Q9BSJ5	609 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	LSG1	Q9H089	658 aa	Known RBP	18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PSTPIP2	Q9H939	334 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	RAPGEFL1	Q9UHV5	662 aa		18.85	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SH2B2	O14492	632 aa	Predicted RBP	18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CAND2	O75155	1236 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	CTSH	P09668	335 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	MCM5	P33992	734 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SP4	Q02446	784 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	FAM26D	Q5JW98	314 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	NFXL1	Q6ZNB6	911 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	NLRX1	Q86UT6	975 aa		18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SP7	Q8TDD2	431 aa	Predicted RBP	18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	SEC63	Q9UGP8	760 aa	Known RBP	18.84	■□□□□ 0.61
PRKAR1A-206	ENST00000585460	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	SLC27A2	O14975	620 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	ITGB5	P18084	799 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	RXRA	P19793	462 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	ARHGAP4	P98171	946 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	LMBR1	Q8WVP7	490 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	TMEM87B	Q96K49	555 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	TANC1	Q9C0D5	1861 aa		18.83	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	GSTTP1	A0A1W2PQM5	241 aa		18.82	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	hCG_1642624	A0A1W2PR95	340 aa		18.82	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	CCDC69	A6NI79	296 aa		18.82	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	CHRNA1	P02708	482 aa		18.82	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	KCNA2	P16389	499 aa		18.82	■□□□□ 0.6
PRKAR1A-206	ENST00000585460	LIFR	P42702	1097 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms