RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 OSBPL7Q9BZF2 842 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 TANC1Q9C0D5 1861 aa16.77■□□□□ 0.27
SDF2-202ENST00000585428 IFIT3O14879 490 aaKnown RBP16.76■□□□□ 0.27
SDF2-202ENST00000585428 TREHO43280 583 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 STAM2O75886 525 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 AMHP03971 560 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 SMIM10L2AP0DMW4 78 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 SMIM10L2BP0DMW5 78 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 PLA2G5P39877 138 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 ADAM17P78536 824 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 PTH1RQ03431 593 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 TRDNQ13061 729 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 INPP4AQ96PE3 977 aaPredicted RBP16.76■□□□□ 0.27
SDF2-202ENST00000585428 C17orf80Q9BSJ5 609 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 LRFN3Q9BTN0 628 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 CD320Q9NPF0 282 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 ARIH1Q9Y4X5 557 aaPredicted RBP16.76■□□□□ 0.27
SDF2-202ENST00000585428 KIAA1217Q5T5P2 1943 aa16.76■□□□□ 0.27
SDF2-202ENST00000585428 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
SDF2-202ENST00000585428 LGALS2P05162 132 aa16.75■□□□□ 0.27
SDF2-202ENST00000585428 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
SDF2-202ENST00000585428 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
SDF2-202ENST00000585428 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
SDF2-202ENST00000585428 GPR20Q99678 358 aa16.75■□□□□ 0.27
SDF2-202ENST00000585428 PI4K2BG5E9Z4 385 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 GPR37L1O60883 481 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 CAND2O75155 1236 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 PDE4AP27815 886 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 NEDD9Q14511 834 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 METTL7BQ6UX53 244 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 CYFIP1Q7L576 1253 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 MYOCDQ8IZQ8 938 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.74■□□□□ 0.27
SDF2-202ENST00000585428 UBE2ZQ9H832 354 aaPredicted RBP16.74■□□□□ 0.27
SDF2-202ENST00000585428 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 RTEL1Q9NZ71 1219 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 PTPRSQ13332 1948 aa16.74■□□□□ 0.27
SDF2-202ENST00000585428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.73■□□□□ 0.27
SDF2-202ENST00000585428 E7EWF7 191 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 CHMLP26374 656 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 WTAPQ15007 396 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 GNPTABQ3T906 1256 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 EPC2Q52LR7 807 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 FAM26DQ5JW98 314 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 SEPT8Q92599 483 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
SDF2-202ENST00000585428 FAM122AQ96E09 287 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 C11orf16Q9NQ32 467 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
SDF2-202ENST00000585428 NCOR1O75376 2440 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 ERICH2A1L162 156 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 H3BNC9 293 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
SDF2-202ENST00000585428 MEIS2O14770 477 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 FIBPO43427 364 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 GNAT1P11488 350 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 TMEM31Q5JXX7 168 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
SDF2-202ENST00000585428 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 ANTXR2P58335 489 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 PCNX4Q63HM2 1172 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 XRRA1Q6P2D8 792 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 RPAINQ86UA6 219 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
SDF2-202ENST00000585428 CHRNA1P02708 482 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 KCNA5P22460 613 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 COL19A1Q14993 1142 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 SART3Q15020 963 aaKnown RBP16.7■□□□□ 0.26
SDF2-202ENST00000585428 PTPROQ16827 1216 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 APBB2Q92870 758 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
SDF2-202ENST00000585428 MYH7BA7E2Y1 1941 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 GRXCR2A6NFK2 248 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 UPP2O95045 317 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
SDF2-202ENST00000585428 TRIM50Q86XT4 487 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
SDF2-202ENST00000585428 GJD3Q8N144 294 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
SDF2-202ENST00000585428 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms