RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 MYADML2A6NDP7 307 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 IGHA2P01877 340 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 CYP3A4P08684 503 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 UBA1P22314 1058 aaKnown RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 NEDD9Q14511 834 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 FSCN1Q16658 493 aaKnown RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 TTC38Q5R3I4 469 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 CELF3Q5SZQ8 465 aaKnown RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 LHX8Q68G74 356 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 FAM173BQ6P4H8 233 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 CCDC62Q6P9F0 684 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 TRMT1LQ7Z2T5 733 aaKnown RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 TEX2Q8IWB9 1127 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 PPP1R13LQ8WUF5 828 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 TNFRSF25Q93038 417 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 GPRASP2Q96D09 838 aa9.46□□□□□ -0.9
ERBB2-216ENST00000584014 INPP4AQ96PE3 977 aaPredicted RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 AGO4Q9HCK5 861 aaKnown RBP9.46□□□□□ -0.9
ERBB2-216ENST00000584014 IPO5O00410 1097 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 MEIS1O00470 390 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 WNT7AO00755 349 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 NKRFO15226 690 aaKnown RBP eCLIP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 SLC37A4O43826 429 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 ZEB2O60315 1214 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 NEMFO60524 1076 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 GAS7O60861 476 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 FARP2O94887 1054 aaPredicted RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 BAG4O95429 457 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 TGFB3P10600 412 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 TXKP42681 527 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 GJA8P48165 433 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 CPT1AP50416 773 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 ATN1P54259 1190 aaPredicted RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 SETQ01105 290 aaPredicted RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 LRRC41Q15345 812 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 KCNA10Q16322 511 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 CALCRLQ16602 461 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 PAWRQ96IZ0 340 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 SENP6Q9GZR1 1112 aaPredicted RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 MTMR6Q9Y217 621 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 GNEQ9Y223 722 aaKnown RBP9.45□□□□□ -0.9
ERBB2-216ENST00000584014 TELO2Q9Y4R8 837 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 FRMPD3Q5JV73 1810 aa9.45□□□□□ -0.9
ERBB2-216ENST00000584014 IGLV3-22A0A075B6J6 115 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 BACH1O14867 736 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 MSH4O15457 936 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 MAFGO15525 162 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 EDIL3O43854 480 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 ZNF286BP0CG31 522 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 KCNA2P16389 499 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.9
ERBB2-216ENST00000584014 ICAM3P32942 547 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 CIITAP33076 1130 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 GJA9P57773 515 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 PSMC6P62333 389 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 ARHGAP1Q07960 439 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 ITGB3BPQ13352 177 aaPredicted RBP9.44□□□□□ -0.9
ERBB2-216ENST00000584014 PKP1Q13835 747 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 CXCL17Q6UXB2 119 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
ERBB2-216ENST00000584014 CRYGNQ8WXF5 182 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 ARID3AQ99856 593 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 TEKT3Q9BXF9 490 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 JPH1Q9HDC5 661 aaPredicted RBP9.44□□□□□ -0.9
ERBB2-216ENST00000584014 SLC9A2Q9UBY0 812 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 OGDHLQ9ULD0 1010 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 PCDHB6Q9Y5E3 794 aa9.44□□□□□ -0.9
ERBB2-216ENST00000584014 DNM1LO00429 736 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 ASGR1P07306 291 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 MMP3P08254 477 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 MARK3P27448 753 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 TOB1P50616 345 aaPredicted RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 ACLYP53396 1101 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 RESTQ13127 1097 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 DGKDQ16760 1214 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 Q4G0T1 1027 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 RILPL1Q5EBL4 403 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 NCAPH2Q6IBW4 605 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 METTL7BQ6UX53 244 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 NIPA1Q7RTP0 329 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 BRAPQ7Z569 592 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 NECAB2Q7Z6G3 386 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 GLG1Q92896 1179 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 GLT1D1Q96MS3 346 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms