RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 STX8Q9UNK0 236 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 HCN4Q9Y3Q4 1203 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 PLIN4Q96Q06 1357 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 A6NJR5 290 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 TSPY2A6NKD2 308 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 PI4K2BG5E9Z4 385 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 NKRFO15226 690 aaKnown RBP eCLIP6.29□□□□□ -1.4
VAPA-207ENST00000583879 LPXNO60711 386 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 BAIAP3O94812 1187 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 ARHGEF15O94989 841 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 TIMP2P16035 220 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 KCNH2Q12809 1159 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 GRB10Q13322 594 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 BFSP2Q13515 415 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 FAM47CQ5HY64 1035 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 OR6J1Q8NGC5 347 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
VAPA-207ENST00000583879 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
VAPA-207ENST00000583879 DCTPP1Q9H773 170 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 PCDHGC3Q9UN70 934 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 CHD9Q3L8U1 2897 aa6.29□□□□□ -1.4
VAPA-207ENST00000583879 PLXNA1Q9UIW2 1896 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 COL11A1P12107 1806 aaPredicted RBP6.28□□□□□ -1.4
VAPA-207ENST00000583879 PARP14Q460N5 1801 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.28□□□□□ -1.4
VAPA-207ENST00000583879 PTPDC1A2A3K4 754 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 NFIBO00712 420 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 MAN1A2O60476 641 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 NMT2O60551 498 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 TXNP10599 105 aaKnown RBP6.28□□□□□ -1.4
VAPA-207ENST00000583879 PDIA4P13667 645 aaKnown RBP6.28□□□□□ -1.4
VAPA-207ENST00000583879 CALML3P27482 149 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 SLC16A2P36021 539 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 KCNJ6P48051 423 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 KCNMA1Q12791 1236 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 GPNMBQ14956 572 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 PTGISQ16647 500 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 TSHZ3Q63HK5 1081 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 RNF207Q6ZRF8 634 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 DNERQ8NFT8 737 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 SCFD2Q8WU76 684 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 PPP1R13LQ8WUF5 828 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 DCAF4Q8WV16 495 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 COPS5Q92905 334 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 GPATCH3Q96I76 525 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 MPHOSPH6Q99547 160 aaKnown RBP6.28□□□□□ -1.4
VAPA-207ENST00000583879 CD320Q9NPF0 282 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 C11orf16Q9NQ32 467 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 PNMA2Q9UL42 364 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 MTMR7Q9Y216 660 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 NOD1Q9Y239 953 aa6.28□□□□□ -1.4
VAPA-207ENST00000583879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
VAPA-207ENST00000583879 TTC28Q96AY4 2481 aa6.27□□□□□ -1.4
VAPA-207ENST00000583879 RAD50Q92878 1312 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 ABHD14A-ACY1A0A1B0GW23 586 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 LCHNA4D1U4 455 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 B4DLN1 442 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 RANBP6O60518 1105 aaKnown RBP6.27□□□□□ -1.41
VAPA-207ENST00000583879 PARNO95453 639 aaKnown RBP6.27□□□□□ -1.41
VAPA-207ENST00000583879 FGRP09769 529 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 EDNRBP24530 442 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 MRPL12P52815 198 aaKnown RBP6.27□□□□□ -1.41
VAPA-207ENST00000583879 RPS6P62753 249 aaKnown RBP6.27□□□□□ -1.41
VAPA-207ENST00000583879 CTDSPL2Q05D32 466 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 PPP2R5BQ15173 497 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 ZMYM1Q5SVZ6 1142 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 SYDE2Q5VT97 1194 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CCDC62Q6P9F0 684 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 RASGRP2Q7LDG7 609 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 SPRED2Q7Z698 418 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 SESTD1Q86VW0 696 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CAGE1Q8TC20 777 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 AFAP1L1Q8TED9 768 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CTAGE1Q96RT6 745 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 RAD9AQ99638 391 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 SUGCTQ9HAC7 445 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 TCP11L1Q9NUJ3 509 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 CHD7Q9P2D1 2997 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 ANAPC4Q9UJX5 808 aa6.27□□□□□ -1.41
VAPA-207ENST00000583879 BAZ2AQ9UIF9 1905 aaKnown RBP6.27□□□□□ -1.41
VAPA-207ENST00000583879 TTC41PQ6P2S7 1318 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 FAM86C2PA6NEL3 165 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 FOXP2O15409 715 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 ORC4O43929 436 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 NBNO60934 754 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 ARIH2O95376 493 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 GJB5O95377 273 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 CXCL10P02778 98 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 TOP1P11387 765 aaKnown RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 SELPP16109 830 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms