RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 TMEM31Q5JXX7 168 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 KCNV1Q6PIU1 500 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 CYB5R4Q7L1T6 521 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 MYOCDQ8IZQ8 938 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 BCAS3Q9H6U6 928 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 MAP3K20Q9NYL2 800 aaKnown RBP23.69■■□□□ 1.38
SRSF1-206ENST00000583741 INSL6Q9Y581 213 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 NLRC5Q86WI3 1866 aa23.69■■□□□ 1.38
SRSF1-206ENST00000583741 PALM3A6NDB9 673 aaPredicted RBP23.68■■□□□ 1.38
SRSF1-206ENST00000583741 RSPH10B2B2RC85 870 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 RSPH10BP0C881 870 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 HOXC8P31273 242 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 HTRA4P83105 476 aaPredicted RBP23.68■■□□□ 1.38
SRSF1-206ENST00000583741 HOMER1Q86YM7 354 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 OSBPL7Q9BZF2 842 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 CTNNA3Q9UI47 895 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 FAM86C2PA6NEL3 165 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 PLEKHG4Q58EX7 1191 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 FBXO22Q8NEZ5 403 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 SP7Q8TDD2 431 aaPredicted RBP23.68■■□□□ 1.38
SRSF1-206ENST00000583741 ATP6V0A1Q93050 837 aa23.68■■□□□ 1.38
SRSF1-206ENST00000583741 AMHP03971 560 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 KCNA5P22460 613 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 CCND2P30279 289 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 PIGSQ96S52 555 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 HCN4Q9Y3Q4 1203 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 C5orf42Q9H799 3197 aa23.67■■□□□ 1.38
SRSF1-206ENST00000583741 C17orf102A2RUQ5 167 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 H3BRB1 525 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 TREHO43280 583 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 GPR37L1O60883 481 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 LGALS2P05162 132 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 SMIM10L2AP0DMW4 78 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 SMIM10L2BP0DMW5 78 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 TGFB3P10600 412 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 LEXMQ3ZCV2 418 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 FCHSD1Q86WN1 690 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 SAMD3Q8N6K7 520 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.66■■□□□ 1.38
SRSF1-206ENST00000583741 TUT1Q9H6E5 874 aaKnown RBP23.66■■□□□ 1.38
SRSF1-206ENST00000583741 MLXIPQ9HAP2 919 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 ANO2Q9NQ90 1003 aa23.66■■□□□ 1.38
SRSF1-206ENST00000583741 MUC6Q6W4X9 2439 aa23.65■■□□□ 1.38
SRSF1-206ENST00000583741 HOXD11P31277 338 aaPredicted RBP23.65■■□□□ 1.38
SRSF1-206ENST00000583741 ATG2AQ2TAZ0 1938 aa23.65■■□□□ 1.38
SRSF1-206ENST00000583741 PI4K2BG5E9Z4 385 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 GCOM1H8Y6P7 765 aaPredicted RBP23.64■■□□□ 1.38
SRSF1-206ENST00000583741 CTSHP09668 335 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 POLR2MP0CAP2 368 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 IL9P15248 144 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 GRM4Q14833 912 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 FAM178BQ8IXR5 827 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 RNPEPQ9H4A4 650 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 RIOX1Q9H6W3 641 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 SENP2Q9HC62 589 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 ARIH1Q9Y4X5 557 aaPredicted RBP23.64■■□□□ 1.38
SRSF1-206ENST00000583741 COL4A6Q14031 1691 aa23.64■■□□□ 1.38
SRSF1-206ENST00000583741 CYTH3O43739 400 aa23.63■■□□□ 1.37
SRSF1-206ENST00000583741 MRPS9P82933 396 aaKnown RBP23.63■■□□□ 1.37
SRSF1-206ENST00000583741 EPC2Q52LR7 807 aa23.63■■□□□ 1.37
SRSF1-206ENST00000583741 MRPL38Q96DV4 380 aaKnown RBP23.63■■□□□ 1.37
SRSF1-206ENST00000583741 MYO7AQ13402 2215 aa23.63■■□□□ 1.37
SRSF1-206ENST00000583741 RALGAPA2Q2PPJ7 1873 aa23.63■■□□□ 1.37
SRSF1-206ENST00000583741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.62■■□□□ 1.37
SRSF1-206ENST00000583741 SEMA3FQ13275 785 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 SEPT8Q92599 483 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 TOP1MTQ969P6 601 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 TELO2Q9Y4R8 837 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 FRMPD4Q14CM0 1322 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 UPP2O95045 317 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 PTCRAQ6ISU1 281 aaPredicted RBP23.62■■□□□ 1.37
SRSF1-206ENST00000583741 TRIM50Q86XT4 487 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 GJD3Q8N144 294 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 INPP4AQ96PE3 977 aaPredicted RBP23.62■■□□□ 1.37
SRSF1-206ENST00000583741 USP26Q9BXU7 913 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 C22orf23Q9BZE7 217 aa23.62■■□□□ 1.37
SRSF1-206ENST00000583741 PIEZO1Q92508 2521 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 TRIOO75962 3097 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 NOP56O00567 594 aaKnown RBP23.61■■□□□ 1.37
SRSF1-206ENST00000583741 EPB41L2O43491 1005 aaKnown RBP23.61■■□□□ 1.37
SRSF1-206ENST00000583741 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 TBC1D32Q96NH3 1257 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 YME1L1Q96TA2 773 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 GPR20Q99678 358 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
SRSF1-206ENST00000583741 SETD4Q9NVD3 440 aa23.61■■□□□ 1.37
SRSF1-206ENST00000583741 WDFY4Q6ZS81 3184 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 PNMA6FA0A0J9YX94 578 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 CAND2O75155 1236 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 ICAM3P32942 547 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 GNPTABQ3T906 1256 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 METTL7BQ6UX53 244 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 NEK9Q8TD19 979 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 TAF6LQ9Y6J9 622 aa23.6■■□□□ 1.37
SRSF1-206ENST00000583741 KAT6AQ92794 2004 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 GRXCR2A6NFK2 248 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 SPATA31C2B4DYI2 1134 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 H3BNC9 293 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 H3BQ06 376 aaPredicted RBP23.59■■□□□ 1.37
SRSF1-206ENST00000583741 CYP21A2P08686 494 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 495.7 ms