RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 SP4Q02446 784 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 RAD9AQ99638 391 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 TUT1Q9H6E5 874 aaKnown RBP17.5■□□□□ 0.39
SREBF1-222ENST00000583732 LINC01553A4QN01 128 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 TGFB3P10600 412 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 CYFIP1Q7L576 1253 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 SERINC5Q86VE9 423 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 TRIM50Q86XT4 487 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 MB21D2Q8IYB1 491 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-222ENST00000583732 MYOCDQ8IZQ8 938 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 DBF4BQ8NFT6 615 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 TELO2Q9Y4R8 837 aa17.49■□□□□ 0.39
SREBF1-222ENST00000583732 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
SREBF1-222ENST00000583732 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 TREHO43280 583 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 EFCAB14O75071 495 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 UTP14CQ5TAP6 766 aaKnown RBP17.48■□□□□ 0.39
SREBF1-222ENST00000583732 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 CTCFLQ8NI51 663 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-222ENST00000583732 TGS1Q96RS0 853 aaKnown RBP17.48■□□□□ 0.39
SREBF1-222ENST00000583732 LY9Q9HBG7 655 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 COG5Q9UP83 839 aa17.48■□□□□ 0.39
SREBF1-222ENST00000583732 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 AMHP03971 560 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 NEDD9Q14511 834 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 NFXL1Q6ZNB6 911 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 IGDCC4Q8TDY8 1250 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 CUL5Q93034 780 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 HLA-CQ95604 372 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 RRP36Q96EU6 259 aaKnown RBP17.47■□□□□ 0.39
SREBF1-222ENST00000583732 INPP4AQ96PE3 977 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-222ENST00000583732 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 SUGCTQ9HAC7 445 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 SETD4Q9NVD3 440 aa17.47■□□□□ 0.39
SREBF1-222ENST00000583732 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 SPATA31C2B4DYI2 1134 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 FIBPO43427 364 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 PRC1O43663 620 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 RXRAP19793 462 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 ICAM3P32942 547 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 ERVK-21P61565 698 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 METTL7BQ6UX53 244 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
SREBF1-222ENST00000583732 MAP4K1Q92918 833 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 GPR20Q99678 358 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 C17orf80Q9BSJ5 609 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 SPZ1Q9BXG8 430 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
SREBF1-222ENST00000583732 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
SREBF1-222ENST00000583732 STAM2O75886 525 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 DDAH1O94760 285 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 UPP2O95045 317 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 HOXC8P31273 242 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 KIF5BP33176 963 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 PLEKHG4Q58EX7 1191 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 USP26Q9BXU7 913 aa17.45■□□□□ 0.38
SREBF1-222ENST00000583732 KAT6AQ92794 2004 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-222ENST00000583732 PCNX4Q63HM2 1172 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 FBXO22Q8NEZ5 403 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 SEPT8Q92599 483 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-222ENST00000583732 INSL6Q9Y581 213 aa17.44■□□□□ 0.38
SREBF1-222ENST00000583732 hCG_1642624A0A1W2PR95 340 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 SH2B2O14492 632 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-222ENST00000583732 MEIS2O14770 477 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-222ENST00000583732 UBE2SQ16763 222 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 NLRX1Q86UT6 975 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
SREBF1-222ENST00000583732 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 LRRC2Q9BYS8 371 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 LMCD1Q9NZU5 365 aa17.43■□□□□ 0.38
SREBF1-222ENST00000583732 GNAT1P11488 350 aa17.42■□□□□ 0.38
SREBF1-222ENST00000583732 MCM5P33992 734 aa17.42■□□□□ 0.38
SREBF1-222ENST00000583732 HTRA4P83105 476 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-222ENST00000583732 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
SREBF1-222ENST00000583732 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
SREBF1-222ENST00000583732 RALGAPA2Q2PPJ7 1873 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-222ENST00000583732 PIK3CDO00329 1044 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 SLC27A2O14975 620 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 ATP9AO75110 1047 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 CAND2O75155 1236 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 MARK3P27448 753 aa17.41■□□□□ 0.38
SREBF1-222ENST00000583732 TCF7P36402 384 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms