RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TCRBV5S4A2TA0A5A2 114 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 SH3D21A4FU49 640 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 ARVCFO00192 962 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 KCNQ2O43526 872 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 GNAT1P11488 350 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 NKX3-2P78367 333 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 SQSTM1Q13501 440 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 TRIM61Q5EBN2 209 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 MTDHQ86UE4 582 aaKnown RBP5.48□□□□□ -1.53
VAPA-206ENST00000583475 STK32CQ86UX6 486 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 ZC3H18Q86VM9 953 aaKnown RBP5.48□□□□□ -1.53
VAPA-206ENST00000583475 TRIM48Q8IWZ4 208 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 UHMK1Q8TAS1 419 aaKnown RBP5.48□□□□□ -1.53
VAPA-206ENST00000583475 SH3RF2Q8TEC5 729 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 ZBTB8AQ96BR9 441 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 MRFAP1L1Q96HT8 127 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 KCNC2Q96PR1 638 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 PIF1Q9H611 641 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 NGRNQ9NPE2 291 aaKnown RBP5.48□□□□□ -1.53
VAPA-206ENST00000583475 DTLQ9NZJ0 730 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 WASF3Q9UPY6 502 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 TELO2Q9Y4R8 837 aa5.48□□□□□ -1.53
VAPA-206ENST00000583475 LTFP02788 710 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 ITGA1P56199 1179 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 TUSC3Q13454 348 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 SMAD4Q13485 552 aaKnown RBP5.47□□□□□ -1.53
VAPA-206ENST00000583475 LIPIQ6XZB0 460 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 C16orf59Q7L2K0 433 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 KYQ8NBH2 561 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 FBXW5Q969U6 566 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 SCLYQ96I15 445 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 PARD6AQ9NPB6 346 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 HSPBP1Q9NZL4 362 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 NDOR1Q9UHB4 597 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 DSEQ9UL01 958 aa5.47□□□□□ -1.53
VAPA-206ENST00000583475 EFCAB14O75071 495 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 PYGMP11217 842 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 NAT1P18440 290 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 EPHA5P54756 1037 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 SLURP1P55000 103 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 GRIN1Q05586 938 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 ADAM9Q13443 819 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 TTLL10Q6ZVT0 673 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 OSTM1Q86WC4 334 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 TTLL11Q8NHH1 800 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 MRPL4Q9BYD3 311 aaKnown RBP5.46□□□□□ -1.54
VAPA-206ENST00000583475 CBLCQ9ULV8 474 aa5.46□□□□□ -1.54
VAPA-206ENST00000583475 AMY2AP04746 511 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 CKMP06732 381 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 INHBBP09529 407 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 KCNA6P17658 529 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 AMY2BP19961 511 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 THBS2P35442 1172 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 GPR19Q15760 415 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 PRR31Q5SQ13 230 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 ARHGAP36Q6ZRI8 547 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 PROSER1Q86XN7 944 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 TTLL6Q8N841 843 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 SYT8Q8NBV8 401 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 MAGEB10Q96LZ2 347 aaPredicted RBP5.45□□□□□ -1.54
VAPA-206ENST00000583475 XYLT2Q9H1B5 865 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 NCOA5Q9HCD5 579 aaKnown RBP5.45□□□□□ -1.54
VAPA-206ENST00000583475 LUC7LQ9NQ29 371 aaKnown RBP5.45□□□□□ -1.54
VAPA-206ENST00000583475 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 RBPJLQ9UBG7 517 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 NUB1Q9Y5A7 615 aa5.45□□□□□ -1.54
VAPA-206ENST00000583475 ACOT7O00154 380 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 PLD2O14939 933 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 RASGRP1O95267 797 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 PDE6AP16499 860 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 FAHP16930 419 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 HOXA5P20719 270 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 RPL13P26373 211 aaKnown RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 SARSP49591 514 aaKnown RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 JAM2P57087 298 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 LACTBP83111 547 aaPredicted RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 RTP5Q14D33 572 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 PAN2Q504Q3 1202 aaKnown RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 TTLL7Q6ZT98 887 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 KCTD1Q719H9 257 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 FGD2Q7Z6J4 655 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 ZC3H7AQ8IWR0 971 aaKnown RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 CARFQ8N187 725 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 C20orf173Q96LM9 149 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 RNPC3Q96LT9 517 aaKnown RBP5.44□□□□□ -1.54
VAPA-206ENST00000583475 CLUHP3Q96NS8 147 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 SPATA25Q9BR10 227 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 CD244Q9BZW8 370 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 TRIM39Q9HCM9 518 aa5.44□□□□□ -1.54
VAPA-206ENST00000583475 TCRBV16S1A1N1A0A5B0 115 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 OTOL1A6NHN0 477 aaPredicted RBP5.43□□□□□ -1.54
VAPA-206ENST00000583475 ZNF561-AS1K7EIQ3 104 aa5.43□□□□□ -1.54
VAPA-206ENST00000583475 MAN2B1O00754 1011 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms