RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
TOP3A-215ENST00000583328 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 APBB2Q92870 758 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 AMNQ9BXJ7 453 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 OSBPL7Q9BZF2 842 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 RNPEPQ9H4A4 650 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
TOP3A-215ENST00000583328 MUTYHQ9UIF7 546 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 SIP14410 1827 aa14.31□□□□□ -0.12
TOP3A-215ENST00000583328 TRIM6-TRIM34B2RNG4 842 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 ZNF213O14771 459 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 MBTPS2O43462 519 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 KDM4AO75164 1064 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 GNAT1P11488 350 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
TOP3A-215ENST00000583328 BMPR1AP36894 532 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 HSD17B4P51659 736 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 HYAL1Q12794 435 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-215ENST00000583328 VSIG10LQ86VR7 867 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-215ENST00000583328 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-215ENST00000583328 LMAN2LQ9H0V9 348 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 IGFLR1Q9H665 355 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 MAP3K20Q9NYL2 800 aaKnown RBP14.3□□□□□ -0.12
TOP3A-215ENST00000583328 NEDD4P46934 1319 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 SALL3Q9BXA9 1300 aa14.3□□□□□ -0.12
TOP3A-215ENST00000583328 MYO7AQ13402 2215 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 C5orf67F2Z3F1 127 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 STXBP3O00186 592 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
TOP3A-215ENST00000583328 GRM6O15303 877 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 CSPG5O95196 566 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 LGALS2P05162 132 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 CCND2P30279 289 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 HOXA13P31271 388 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-215ENST00000583328 NT5C2P49902 561 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 PDE1AP54750 535 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 DLX2Q07687 328 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-215ENST00000583328 PGM5Q15124 567 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 STOX1Q6ZVD7 989 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 RNF135Q8IUD6 432 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
TOP3A-215ENST00000583328 SNX27Q96L92 541 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-215ENST00000583328 USP26Q9BXU7 913 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 RWDD3Q9Y3V2 267 aa14.29□□□□□ -0.12
TOP3A-215ENST00000583328 OPLAHO14841 1288 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 HOXC8P31273 242 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
TOP3A-215ENST00000583328 SMAD4Q13485 552 aaKnown RBP14.28□□□□□ -0.12
TOP3A-215ENST00000583328 TICAM2Q86XR7 235 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 IL31RAQ8NI17 732 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 EDAQ92838 391 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 CD207Q9UJ71 328 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
TOP3A-215ENST00000583328 B4E1Z4 1266 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 GHRHRQ02643 423 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 AAMPQ13685 434 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 STAG2Q8N3U4 1231 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 ENAHQ8N8S7 591 aaPredicted RBP14.27□□□□□ -0.13
TOP3A-215ENST00000583328 RILPL2Q969X0 211 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 PBXIP1Q96AQ6 731 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 MICAL3Q7RTP6 2002 aa14.27□□□□□ -0.13
TOP3A-215ENST00000583328 KLRF2D3W0D1 207 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-215ENST00000583328 ZBTB5O15062 677 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 GTF2F1P35269 517 aaKnown RBP eCLIP14.26□□□□□ -0.13
TOP3A-215ENST00000583328 NDUFV1P49821 464 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 PTPN5P54829 565 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 BTG3Q14201 252 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-215ENST00000583328 NEDD9Q14511 834 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 FAM26DQ5JW98 314 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 UTP14CQ5TAP6 766 aaKnown RBP14.26□□□□□ -0.13
TOP3A-215ENST00000583328 CYFIP1Q7L576 1253 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 BMP8AQ7Z5Y6 402 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 PPP2R3CQ969Q6 453 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
TOP3A-215ENST00000583328 ADGRA3Q8IWK6 1321 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 M0R296 226 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 ENPP3O14638 875 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 LINC01565O15544 149 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 PPP1R11O60927 126 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-215ENST00000583328 TBX10O75333 385 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 LINC00271P0C7V0 271 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 GHRP10912 638 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 ADAM15Q13444 863 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 PKN1Q16512 942 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 GNPTABQ3T906 1256 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms