RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CNR2P34972 360 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 GABREP78334 506 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 SPATS1Q496A3 300 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 FNDC3BQ53EP0 1204 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 RNF187Q5TA31 235 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 KCNT2Q6UVM3 1135 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 ETV3LQ6ZN32 361 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 TEX2Q8IWB9 1127 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 SLC7A14Q8TBB6 771 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 PTPRN2Q92932 1015 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 GPR20Q99678 358 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 MRPL4Q9BYD3 311 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 SLC52A2Q9HAB3 445 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 PLAAQ9Y263 795 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 COA3Q9Y2R0 106 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 PRICKLE3O43900 615 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 PPP1R11O60927 126 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 NCLP19338 710 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 RPL11P62913 178 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 ZNF827Q17R98 1081 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 MILR1Q7Z6M3 343 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 FILIP1Q7Z7B0 1213 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 CCDC103Q8IW40 242 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 NIM1KQ8IY84 436 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 NINJ1Q92982 152 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 MMP19Q99542 508 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 MTA3Q9BTC8 594 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 SFMBT1Q9UHJ3 866 aa6.71□□□□□ -1.34
SMCHD1-205ENST00000581383 ASXL2Q76L83 1435 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 RFPL3O75679 317 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 LCP1P13796 627 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 SDSP20132 328 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 MASP1P48740 699 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 CEP68Q76N32 757 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 CPA5Q8WXQ8 436 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 DIO2Q92813 273 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 NOX5Q96PH1 765 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 PHF20Q9BVI0 1012 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 IFT57Q9NWB7 429 aa6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 TIMM13Q9Y5L4 95 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-205ENST00000581383 DNAJC6O75061 913 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 EFCAB14O75071 495 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 LTBRP36941 435 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 HTRA3P83110 453 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 INF2Q27J81 1249 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 TRIM61Q5EBN2 209 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 MBLAC2Q68D91 279 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 STYK1Q6J9G0 422 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 MAMDC2Q7Z304 686 aaPredicted RBP6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 BRAPQ7Z569 592 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 FGD2Q7Z6J4 655 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 STK32CQ86UX6 486 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 MFSD3Q96ES6 412 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 SPC25Q9HBM1 224 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 PRKAB1Q9Y478 270 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 ZNF536O15090 1300 aa6.69□□□□□ -1.34
SMCHD1-205ENST00000581383 KCNQ2O43526 872 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 CRTAMO95727 393 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 GTF2A2P52657 109 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 KIAA2012Q0VF49 1180 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 E4F1Q66K89 784 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 GSTCDQ8NEC7 633 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 TMEM169Q96HH4 297 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 MAGEB10Q96LZ2 347 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 TRIM39Q9HCM9 518 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 PCDHA9Q9Y5H5 950 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 NPFFR2Q9Y5X5 522 aa6.68□□□□□ -1.34
SMCHD1-205ENST00000581383 MSCO60682 206 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 RASGRP1O95267 797 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 FPR2P25090 351 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 KCNAB2Q13303 367 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 ZFYVE27Q5T4F4 411 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 MROH9Q5TGP6 573 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 PRAMEF18Q5VWM3 479 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 CNNM4Q6P4Q7 775 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 BORAQ6PGQ7 559 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 RSPO2Q6UXX9 243 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 IFNL3Q8IZI9 196 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 RCBTB1Q8NDN9 531 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 PLEKHO2Q8TD55 490 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 SCLYQ96I15 445 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 GPR27Q9NS67 375 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 PCDHA8Q9Y5H6 950 aa6.67□□□□□ -1.34
SMCHD1-205ENST00000581383 PCDHA2Q9Y5H9 948 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms