RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 GPR20Q99678 358 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 PBX4Q9BYU1 374 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 RIC8AQ9NPQ8 531 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 UBIAD1Q9Y5Z9 338 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 V9GY48 417 aaPredicted RBP12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 BRWD1Q9NSI6 2320 aa12.17□□□□□ -0.46
SUPT4H1-204ENST00000580947 ADAMTS3O15072 1205 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 ATP9AO75110 1047 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 LGALS2P05162 132 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 NEFLP07196 543 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 PFKMP08237 780 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 RFC2P35250 354 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 NEDD9Q14511 834 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 NTRK3Q16288 839 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 OTOP2Q7RTS6 562 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 RPUSD2Q8IZ73 545 aaKnown RBP12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 KATNAL1Q9BW62 490 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
SUPT4H1-204ENST00000580947 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 NAPAP54920 295 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 CHMP4BP1P59074 171 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 PTK7Q13308 1070 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 BFSP2Q13515 415 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 TOB2Q14106 344 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 PKN1Q16512 942 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 SERINC5Q86VE9 423 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 TRIM50Q86XT4 487 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 ZNF713Q8N859 430 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 AFAP1L1Q8TED9 768 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 CRYGNQ8WXF5 182 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-204ENST00000580947 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.47
SUPT4H1-204ENST00000580947 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 H3BRB1 525 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 CXCL10P02778 98 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 CKBP12277 381 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 ADAM17P78536 824 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 GRIN2CQ14957 1233 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 TUT1Q9H6E5 874 aaKnown RBP12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 NOD1Q9Y239 953 aa12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
SUPT4H1-204ENST00000580947 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 NBNO60934 754 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SMIM10L2AP0DMW4 78 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SMIM10L2BP0DMW5 78 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SCG2P13521 617 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SELPP16109 830 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 PSMA5P28066 241 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SREBF1P36956 1147 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 ADCY7P51828 1080 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 MTMR1Q13613 665 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 LRRC8DQ7L1W4 858 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 RETREG2Q8NC44 543 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 ANO3Q9BYT9 981 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 TM6SF1Q9BZW5 370 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 RNPEPQ9H4A4 650 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 ATG2AQ2TAZ0 1938 aa12.13□□□□□ -0.47
SUPT4H1-204ENST00000580947 TTC3P53804 2025 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms