RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CCDC96Q2M329 555 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 UBALD2Q8IYN6 164 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 DTWD2Q8NBA8 298 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 MICAL1Q8TDZ2 1067 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 S1PR5Q9H228 398 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 RWDD3Q9Y3V2 267 aa16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-213ENST00000580446 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 TREHO43280 583 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 TRIM27P14373 513 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 IBSPP21815 317 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 TECP42680 631 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 GATMP50440 423 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 CLCN5P51795 746 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 OTOGLQ3ZCN5 2332 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 ATP8B4Q8TF62 1192 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 ATP6V0A1Q93050 837 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
CSNK1D-213ENST00000580446 DCDC2BA2VCK2 349 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 NMT2O60551 498 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 NPR3P17342 541 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 ATXN1P54253 815 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 PLVAPQ9BX97 442 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 SETXQ7Z333 2677 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 FASNP49327 2511 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 FRMPD2Q68DX3 1309 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-213ENST00000580446 ZFYVE26Q68DK2 2539 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 GSG1L2A8MUP6 293 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 GHRP10912 638 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 RARSP54136 660 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 HAUS7Q99871 368 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 KATNAL1Q9BW62 490 aa16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-213ENST00000580446 LOC102724159A0A0B4J2E5 919 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 AOC1P19801 751 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 TFAP4Q01664 338 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 ACAP1Q15027 740 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 PWP2Q15269 919 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 ANKRD54Q6NXT1 300 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 POMKQ9H5K3 350 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 GPCPD1Q9NPB8 672 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 LIMD1Q9UGP4 676 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
CSNK1D-213ENST00000580446 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 DUSP6Q16828 381 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 CRIPAKQ8N1N5 446 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 NEDD1Q8NHV4 660 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 TBC1D5Q92609 795 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 RUBCNQ92622 972 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 P2RX5Q93086 422 aa16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 MPHOSPH6Q99547 160 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-213ENST00000580446 ENPP3O14638 875 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 PLA2G6O60733 806 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 DGKIO75912 1065 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 ERVFC1P60507 584 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 ERVK-5Q9HDB9 667 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 HCSTQ9UBK5 93 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 FAM208BQ5VWN6 2430 aa16.61■□□□□ 0.25
CSNK1D-213ENST00000580446 TDO2P48775 406 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 USH1GQ495M9 461 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 PPTC7Q8NI37 304 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 LINC01599Q8WXQ3 324 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 ARHGAP45Q92619 1136 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 APBB2Q92870 758 aa16.6■□□□□ 0.25
CSNK1D-213ENST00000580446 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.255e-10■□□□□ 9.7
CSNK1D-213ENST00000580446 UBE3CQ15386 1083 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 PLPP4Q5VZY2 271 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 KANK3Q6NY19 840 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 SIX5Q8N196 739 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
CSNK1D-213ENST00000580446 CHRNA1P02708 482 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 SPECC1Q5M775 1068 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms