RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PFKFB3Q16875 520 aaPredicted RBP28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 FAM47CQ5HY64 1035 aa28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 ZNF274Q96GC6 653 aaPredicted RBP28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 ZFP91Q96JP5 570 aaPredicted RBP28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 INPP4AQ96PE3 977 aaPredicted RBP28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 GBF1Q92538 1859 aa28.48■■■□□ 2.15
CDC42EP4-205ENST00000580315 PRPF3O43395 683 aaKnown RBP28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 MMP3P08254 477 aa28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 SCG2P13521 617 aa28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 CCT2P78371 535 aaKnown RBP28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 MRPS5P82675 430 aaKnown RBP28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 NFRKBQ6P4R8 1299 aa28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 CCDC12Q8WUD4 166 aaPredicted RBP28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 PPP1R13LQ8WUF5 828 aa28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 RTEL1Q9NZ71 1219 aa28.47■■■□□ 2.15
CDC42EP4-205ENST00000580315 SMCO2A6NFE2 343 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 DGKDQ16760 1214 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 TYW1BQ6NUM6 668 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 NLRX1Q86UT6 975 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 PPTC7Q8NI37 304 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 RNF26Q9BY78 433 aaPredicted RBP28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 PCDHA6Q9UN73 950 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 PCDHA8Q9Y5H6 950 aa28.46■■■□□ 2.15
CDC42EP4-205ENST00000580315 FIBPO43427 364 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 GGPS1O95749 300 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 FOSP01100 380 aaPredicted RBP28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 IFNAR1P17181 557 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 UBA1P22314 1058 aaKnown RBP28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 ICAM3P32942 547 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 CELF3Q5SZQ8 465 aaKnown RBP28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 PHKBQ93100 1093 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 MLXIPQ9HAP2 919 aa28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 NCOA5Q9HCD5 579 aaKnown RBP28.45■■■□□ 2.14
CDC42EP4-205ENST00000580315 SCN10AQ9Y5Y9 1956 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 TRANK1O15050 2925 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 REV3LO60673 3130 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 SPATA31C2B4DYI2 1134 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 PITPNM1O00562 1244 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 CPLX1O14810 134 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 RFC2P35250 354 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 NTRK3Q16288 839 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 MYSM1Q5VVJ2 828 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 CPLX2Q6PUV4 134 aaKnown RBP28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 ADAMTS19Q8TE59 1207 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 SPATA33Q96N06 139 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 SLC26A6Q9BXS9 759 aa28.44■■■□□ 2.14
CDC42EP4-205ENST00000580315 IQCF3P0C7M6 154 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 ACTN1P12814 892 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 PTPN11Q06124 597 aaPredicted RBP28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 NEDD9Q14511 834 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 TRIM22Q8IYM9 498 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 RETREG2Q8NC44 543 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 CDHR1Q96JP9 859 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 XIRP2A4UGR9 3374 aa28.43■■■□□ 2.14
CDC42EP4-205ENST00000580315 BDP1A6H8Y1 2624 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 KIAA1217Q5T5P2 1943 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 CA3P07451 260 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 SP2Q02086 613 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 AP3B2Q13367 1082 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 ANKRD1Q15327 319 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 LARP6Q9BRS8 491 aaKnown RBP28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 C6orf50Q9HD87 102 aa28.42■■■□□ 2.14
CDC42EP4-205ENST00000580315 ESYT2A0FGR8 921 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 SORBS3O60504 671 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 PPFIA4O75335 1185 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 CHMP4BP1P59074 171 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 STK3Q13188 491 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 PKN1Q16512 942 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 MICALL1Q8N3F8 863 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 GPRASP2Q96D09 838 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 IL17RAQ96F46 866 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 TSPYL2Q9H2G4 693 aaPredicted RBP28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 NCOR1O75376 2440 aa28.41■■■□□ 2.14
CDC42EP4-205ENST00000580315 SSRP1Q08945 709 aaKnown RBP28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 MCTP2Q6DN12 878 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 GIMAP8Q8ND71 665 aaPredicted RBP28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 CCDC148Q8NFR7 591 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 PHOSPHO2Q8TCD6 241 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 SLC9A7Q96T83 725 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 SENP7Q9BQF6 1050 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 KATNAL1Q9BW62 490 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 ANO3Q9BYT9 981 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 NOD1Q9Y239 953 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 SCN5AQ14524 2016 aa28.4■■■□□ 2.14
CDC42EP4-205ENST00000580315 NOP56O00567 594 aaKnown RBP28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 SEC24BO95487 1268 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 GNA11P29992 359 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 BFSP2Q13515 415 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 HSDL1Q3SXM5 330 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 METTL7BQ6UX53 244 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 IL27Q8NEV9 243 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 UHRF1Q96T88 793 aaPredicted RBP28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 FTOQ9C0B1 505 aaKnown RBP eCLIP28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 ZMYND12Q9H0C1 365 aa28.39■■■□□ 2.14
CDC42EP4-205ENST00000580315 RFXAPO00287 272 aa28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 PPFIA3O75145 1194 aa28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 HOXD8P13378 290 aaPredicted RBP28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 SEMA3FQ13275 785 aa28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 CYFIP1Q7L576 1253 aa28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 SLKQ9H2G2 1235 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms