RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CFBP00751 764 aa14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 IRS1P35568 1242 aa14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 QRICH1Q2TAL8 776 aa14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HERC4Q5GLZ8 1057 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CELF3Q5SZQ8 465 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HFE2Q6ZVN8 426 aa14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 FIBCD1Q8N539 461 aa14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 OTUD7AQ8TE49 926 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C5orf67F2Z3F1 127 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 H3BRB1 525 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 UPP2O95045 317 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HOXC8P31273 242 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HSD17B4P51659 736 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HAND2P61296 217 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 GHRHRQ02643 423 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TRAF1Q13077 416 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CTC1Q2NKJ3 1217 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HSDL1Q3SXM5 330 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RPAINQ86UA6 219 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PPP2R3CQ969Q6 453 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 IL17RAQ96F46 866 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PDCD2LQ9BRP1 358 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C16orf70Q9BSU1 422 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 AMNQ9BXJ7 453 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 USP26Q9BXU7 913 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CPVLQ9H3G5 476 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TUT1Q9H6E5 874 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MYO15AQ9UKN7 3530 aa14.21□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PARP1P09874 1014 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 MYCLP12524 364 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CTNNB1P35222 781 aa14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 STOX1Q6ZVD7 989 aa14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 BMP8AQ7Z5Y6 402 aa14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ANKS1AQ92625 1134 aa14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SNX27Q96L92 541 aa14.2□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CCDC171Q6TFL3 1326 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 VPS13AQ96RL7 3174 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 A0A0D9SFI3 127 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZNF213O14771 459 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 MBTPS2O43462 519 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 RGS20O76081 388 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 BMPR1AP36894 532 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 LTBRP36941 435 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PTPN5P54829 565 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SMAD4Q13485 552 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 HIC1Q14526 733 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 JMJD4Q9H9V9 463 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 KAT6AQ92794 2004 aa14.19□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TREHO43280 583 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 LGALS2P05162 132 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CTSHP09668 335 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SMIM10L2AP0DMW4 78 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SMIM10L2BP0DMW5 78 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 UBA1P22314 1058 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CCND2P30279 289 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PGM5Q15124 567 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 GNPTABQ3T906 1256 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 RNF135Q8IUD6 432 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TBC1D10CQ8IV04 446 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 EDAQ92838 391 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 VAT1LQ9HCJ6 419 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 MUTYHQ9UIF7 546 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZNF215Q9UL58 517 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 DMDP11532 3685 aa14.18□□□□□ -0.14
CDK5RAP3-216ENST00000579853 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ST18O60284 1047 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 KDM4AO75164 1064 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PDE1AP54750 535 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SP2Q02086 613 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 HYAL1Q12794 435 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NEDD9Q14511 834 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 FAM26DQ5JW98 314 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZNF589Q86UQ0 364 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CLP1Q92989 425 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CD207Q9UJ71 328 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PCDHA1Q9Y5I3 950 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CACNA1AO00555 2505 aa14.17□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NEDD4P46934 1319 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ADGRA3Q8IWK6 1321 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 STXBP3O00186 592 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZBTB5O15062 677 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 STAM2O75886 525 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 MMP1P03956 469 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NMIQ13287 307 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NAALADL2Q58DX5 795 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 METTL7BQ6UX53 244 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms