RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-210ENST00000579308 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
CSNK1D-210ENST00000579308 RNPEPQ9H4A4 650 aa12.34□□□□□ -0.43
CSNK1D-210ENST00000579308 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-210ENST00000579308 MLXIPQ9HAP2 919 aa12.34□□□□□ -0.43
CSNK1D-210ENST00000579308 C17orf102A2RUQ5 167 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 E7EWF7 191 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 TREHO43280 583 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 STAM2O75886 525 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 LGALS2P05162 132 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 THPOP40225 353 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 ANTXR2P58335 489 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 ADAM17P78536 824 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 ATP6V0A1Q93050 837 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 C1QTNF1Q9BXJ1 281 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 TELO2Q9Y4R8 837 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 INSL6Q9Y581 213 aa12.33□□□□□ -0.44
CSNK1D-210ENST00000579308 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 TANC1Q9C0D5 1861 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 CAND2O75155 1236 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 NEDD9Q14511 834 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 WTAPQ15007 396 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 MAP4K1Q92918 833 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 GPR20Q99678 358 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 SENP7Q9BQF6 1050 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-210ENST00000579308 ERICH2A1L162 156 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 MEIS2O14770 477 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 SGSM2O43147 1006 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 AMHP03971 560 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 FAM26DQ5JW98 314 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 MB21D2Q8IYB1 491 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 RTEL1Q9NZ71 1219 aa12.31□□□□□ -0.44
CSNK1D-210ENST00000579308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 FIBPO43427 364 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 PCNX4Q63HM2 1172 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 MYOCDQ8IZQ8 938 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 SEPT8Q92599 483 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 UBE2ZQ9H832 354 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 LY9Q9HBG7 655 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 CD320Q9NPF0 282 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
CSNK1D-210ENST00000579308 NOP56O00567 594 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 GNAT1P11488 350 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 LEXMQ3ZCV2 418 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 EPC2Q52LR7 807 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 MTA3Q9BTC8 594 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-210ENST00000579308 PI4K2BG5E9Z4 385 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 H3BNC9 293 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 ATP9AO75110 1047 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 DDAH1O94760 285 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 CHRNA1P02708 482 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 PLA2G5P39877 138 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 COL9A3Q14050 684 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 COL19A1Q14993 1142 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 ZNF654Q8IZM8 581 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 LMBR1Q8WVP7 490 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 MRPL38Q96DV4 380 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 RRP36Q96EU6 259 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 LZTS2Q9BRK4 669 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 BRWD1Q9NSI6 2320 aa12.28□□□□□ -0.44
CSNK1D-210ENST00000579308 GPR37L1O60883 481 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms