RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 LRCH2Q5VUJ6 765 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SCAND2PQ9GZW5 306 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KCNMB3Q9NPA1 279 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZEB2O60315 1214 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 YEATS4O95619 227 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 GGPS1O95749 300 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SMPD1P17405 629 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 UBA1P22314 1058 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CPT1AP50416 773 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TRIM32Q13049 653 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PTGDRQ13258 359 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NBR1Q14596 966 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 LY6KQ17RY6 165 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CELF3Q5SZQ8 465 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 OR6J1Q8NGC5 347 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 LENG9Q96B70 501 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SLC9A2Q9UBY0 812 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
CDK5RAP3-210ENST00000578733 WDR64B1ANS9 1081 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 EDIL3O43854 480 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KCNA2P16389 499 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SFNP31947 248 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TXKP42681 527 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 JAK3P52333 1124 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DNM1Q05193 864 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SEMA3FQ13275 785 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZNF746Q6NUN9 644 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CYFIP1Q7L576 1253 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TLK2Q86UE8 772 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RDM1Q8NG50 284 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FERMT2Q96AC1 680 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SPATA32Q96LK8 384 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RNF208Q9H0X6 261 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MORC2Q9Y6X9 1032 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ELP1O95163 1332 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 SPTLC2O15270 562 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PPP6R2O75170 966 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ARIH2O95376 493 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CCL5P13501 91 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 MIS18BP1Q6P0N0 1132 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 RNF180Q86T96 592 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
CDK5RAP3-210ENST00000578733 WNT7AO00755 349 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 DYNC1LI2O43237 492 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CHMP2AO43633 222 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 KPNA6O60684 536 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ATP9AO75110 1047 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PSMD10O75832 226 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PSAPP07602 524 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 LONP1P36776 959 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 TXLNAP40222 546 aa12.69□□□□□ -0.38
CDK5RAP3-210ENST00000578733 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms