RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 MYOGP15173 224 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 BFSP2Q13515 415 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 GPNMBQ14956 572 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 BRF1Q92994 677 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NKX2-4Q9H2Z4 354 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ZNF576Q9H609 170 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 FIBPO43427 364 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 LGALS2P05162 132 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ITGB5P18084 799 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NAPAP54920 295 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NEDD9Q14511 834 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TJAP1Q5JTD0 557 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 UTP14CQ5TAP6 766 aaKnown RBP16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TRIM50Q86XT4 487 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 KATNAL1Q9BW62 490 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 YBX2Q9Y2T7 364 aaKnown RBP16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
HS3ST3A1-202ENST00000578576 H3BRB1 525 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NOP56O00567 594 aaKnown RBP16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 STAM2O75886 525 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 CKBP12277 381 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 METTL7BQ6UX53 244 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NLRX1Q86UT6 975 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 GPR20Q99678 358 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 MTIF3Q9H2K0 278 aaKnown RBP16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 KAT6AQ92794 2004 aa16.24■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PIEZO1Q92508 2521 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 STXBP3O00186 592 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RPS6KB1P23443 525 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PLA2G5P39877 138 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TCTN1Q2MV58 587 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ZNF618Q5T7W0 954 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 XRRA1Q6P2D8 792 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 CYP2W1Q8TAV3 490 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RNPEPQ9H4A4 650 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 UBIAD1Q9Y5Z9 338 aa16.23■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TMEM265A0A087WTH1 108 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 NBNO60934 754 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 REC8O95072 547 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SELPP16109 830 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ATP2A2P16615 1042 aaKnown RBP16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ADCY7P51828 1080 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PTK7Q13308 1070 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TRIM71Q2Q1W2 868 aaKnown RBP16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 LRRC8DQ7L1W4 858 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TMCO2Q7Z6W1 182 aaPredicted RBP16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 CCDC155Q8N6L0 562 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 USP38Q8NB14 1042 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PRDM12Q9H4Q4 367 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SETD4Q9NVD3 440 aa16.22■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PTPRSQ13332 1948 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TRANK1O15050 2925 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 C17orf102A2RUQ5 167 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TREHO43280 583 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ACTN1P12814 892 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 KCNA2P16389 499 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 RFC2P35250 354 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 TRAF7Q6Q0C0 670 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 ATP6V0A1Q93050 837 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PHKBQ93100 1093 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 GPRASP2Q96D09 838 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 UIMC1Q96RL1 719 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 OSBPL7Q9BZF2 842 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 BARHL2Q9NY43 387 aa16.21■□□□□ 0.19
HS3ST3A1-202ENST00000578576 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 PFKMP08237 780 aa16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 ARP10275 920 aa16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 THPOP40225 353 aa16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 CCT2P78371 535 aaKnown RBP16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 MTMR1Q13613 665 aa16.2■□□□□ 0.18
HS3ST3A1-202ENST00000578576 MBTPS1Q14703 1052 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms