RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 SESTD1Q86VW0 696 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
GGA3-204ENST00000578208 SCN10AQ9Y5Y9 1956 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 LGALS2P05162 132 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 ITGB5P18084 799 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 CYP2C18P33260 490 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 SCRN1Q12765 414 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 BFSP2Q13515 415 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 PTGISQ16647 500 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
GGA3-204ENST00000578208 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 PPP1R13LQ8WUF5 828 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 KAT2BQ92831 832 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 NOC4LQ9BVI4 516 aaKnown RBP13.25□□□□□ -0.29
GGA3-204ENST00000578208 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 TCEAL9Q9UHQ7 104 aa13.25□□□□□ -0.29
GGA3-204ENST00000578208 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 MYH7BA7E2Y1 1941 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 H3BRB1 525 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 CYP2C9P11712 490 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 KCNA2P16389 499 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 SHHQ15465 462 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
GGA3-204ENST00000578208 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
GGA3-204ENST00000578208 NIPA1Q7RTP0 329 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 WASF1Q92558 559 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
GGA3-204ENST00000578208 GPR20Q99678 358 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
GGA3-204ENST00000578208 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
GGA3-204ENST00000578208 KCNH7Q9NS40 1196 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 GTF2IRD1Q9UHL9 959 aa13.24□□□□□ -0.29
GGA3-204ENST00000578208 HAS3O00219 553 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 ATP9AO75110 1047 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 CSF2RAP15509 400 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 CCL23P55773 120 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 SETQ01105 290 aaPredicted RBP13.23□□□□□ -0.29
GGA3-204ENST00000578208 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
GGA3-204ENST00000578208 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
GGA3-204ENST00000578208 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 SEPT1Q8WYJ6 367 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 C16orf70Q9BSU1 422 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 BCAS3Q9H6U6 928 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 JPH1Q9HDC5 661 aaPredicted RBP13.23□□□□□ -0.29
GGA3-204ENST00000578208 IL23AQ9NPF7 189 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
GGA3-204ENST00000578208 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 NFASCO94856 1347 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 UMODL1Q5DID0 1318 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 MEIS1O00470 390 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 CYP3A4P08684 503 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 GNAT1P11488 350 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 TCF7P36402 384 aaPredicted RBP13.22□□□□□ -0.29
GGA3-204ENST00000578208 BLIDQ8IZY5 108 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 GLG1Q92896 1179 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 GTF3C6Q969F1 213 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
GGA3-204ENST00000578208 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
GGA3-204ENST00000578208 SOX1O00570 391 aaPredicted RBP13.21□□□□□ -0.29
GGA3-204ENST00000578208 PFKMP08237 780 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 ARP10275 920 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 RFC2P35250 354 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 EPHB4P54760 987 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 PTK7Q13308 1070 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 ME3Q16798 604 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 KRT25Q7Z3Z0 450 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 DAGLBQ8NCG7 672 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 SCLYQ96I15 445 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.292e-7■■□□□ 14.2
GGA3-204ENST00000578208 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
GGA3-204ENST00000578208 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
GGA3-204ENST00000578208 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
GGA3-204ENST00000578208 FGBP02675 491 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 ACRP10323 421 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 TRIM29Q14134 588 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms