RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RB1P06400 928 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 UBA1P22314 1058 aaKnown RBP15.52■□□□□ 0.08
COPS3-214ENST00000577246 HOXC8P31273 242 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 NHLH1Q02575 133 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 GNPTABQ3T906 1256 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 VSIG10LQ86VR7 867 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 IL17RAQ96F46 866 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 USP26Q9BXU7 913 aa15.52■□□□□ 0.08
COPS3-214ENST00000577246 TRIP12Q14669 1992 aaPredicted RBP15.52■□□□□ 0.07
COPS3-214ENST00000577246 MUC6Q6W4X9 2439 aa15.52■□□□□ 0.07
COPS3-214ENST00000577246 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 RGS20O76081 388 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 SMIM10L2AP0DMW4 78 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 SMIM10L2BP0DMW5 78 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 PGM5Q15124 567 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 FIBCD1Q8N539 461 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 ENAHQ8N8S7 591 aaPredicted RBP15.51■□□□□ 0.07
COPS3-214ENST00000577246 ZNF215Q9UL58 517 aaPredicted RBP15.51■□□□□ 0.07
COPS3-214ENST00000577246 PCDHA1Q9Y5I3 950 aa15.51■□□□□ 0.07
COPS3-214ENST00000577246 C5orf67F2Z3F1 127 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 ZBTB5O15062 677 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 STAM2O75886 525 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 LGALS2P05162 132 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 CTSHP09668 335 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 CTNNB1P35222 781 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 NEDD9Q14511 834 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 HIC1Q14526 733 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 RPAINQ86UA6 219 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 PPP2R3CQ969Q6 453 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 RILPL2Q969X0 211 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 FBXL18Q96ME1 805 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 KRT23Q9C075 422 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 CNNM2Q9H8M5 875 aa15.5■□□□□ 0.07
COPS3-214ENST00000577246 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 B4E1Z4 1266 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 GCOM1H8Y6P7 765 aaPredicted RBP15.49■□□□□ 0.07
COPS3-214ENST00000577246 OPLAHO14841 1288 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 TREHO43280 583 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 SORBS3O60504 671 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 POLR2MP0CAP2 368 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 SMAD2Q15796 467 aaKnown RBP15.49■□□□□ 0.07
COPS3-214ENST00000577246 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
COPS3-214ENST00000577246 IFIT1BQ5T764 474 aaKnown RBP15.49■□□□□ 0.07
COPS3-214ENST00000577246 RNPEPQ9H4A4 650 aa15.49■□□□□ 0.07
COPS3-214ENST00000577246 BRWD1Q9NSI6 2320 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.48■□□□□ 0.07
COPS3-214ENST00000577246 KLRF2D3W0D1 207 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 HOXA13P31271 388 aaPredicted RBP15.48■□□□□ 0.07
COPS3-214ENST00000577246 IRS1P35568 1242 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 BMPR1AP36894 532 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 SP2Q02086 613 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 CTC1Q2NKJ3 1217 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 METTL7BQ6UX53 244 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 ZSWIM5Q9P217 1185 aa15.48■□□□□ 0.07
COPS3-214ENST00000577246 ADGRA3Q8IWK6 1321 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 HIP1O00291 1037 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 SDSP20132 328 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 SMAD4Q13485 552 aaKnown RBP15.47■□□□□ 0.07
COPS3-214ENST00000577246 PKN1Q16512 942 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 HERC4Q5GLZ8 1057 aaPredicted RBP15.47■□□□□ 0.07
COPS3-214ENST00000577246 FAM26DQ5JW98 314 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 HFE2Q6ZVN8 426 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 RSPH3Q86UC2 560 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 PRRX2Q99811 253 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 PLVAPQ9BX97 442 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 SETD4Q9NVD3 440 aa15.47■□□□□ 0.07
COPS3-214ENST00000577246 NRCAMQ92823 1304 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 FIBPO43427 364 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 ICAM3P32942 547 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 LTBRP36941 435 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 ARHGAP4P98171 946 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
COPS3-214ENST00000577246 TAF2Q6P1X5 1199 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 FCHSD1Q86WN1 690 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 STAG2Q8N3U4 1231 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 IL31RAQ8NI17 732 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 CLP1Q92989 425 aaKnown RBP15.46■□□□□ 0.07
COPS3-214ENST00000577246 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
COPS3-214ENST00000577246 STXBP3O00186 592 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 MBTPS2O43462 519 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 PPP1R11O60927 126 aaPredicted RBP15.45■□□□□ 0.06
COPS3-214ENST00000577246 MMP1P03956 469 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 RPLP2P05387 115 aaKnown RBP15.45■□□□□ 0.06
COPS3-214ENST00000577246 HYAL1Q12794 435 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 CYFIP1Q7L576 1253 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
COPS3-214ENST00000577246 LMBR1Q8WVP7 490 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
COPS3-214ENST00000577246 GPR20Q99678 358 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 MUTYHQ9UIF7 546 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 CD207Q9UJ71 328 aa15.45■□□□□ 0.06
COPS3-214ENST00000577246 SPATA31C2B4DYI2 1134 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 GRM6O15303 877 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 NDUFV1P49821 464 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 BTG3Q14201 252 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms