RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 VSIG10LQ86VR7 867 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 FIBCD1Q8N539 461 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 PDCD2LQ9BRP1 358 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 TUT1Q9H6E5 874 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 KAT14Q9H8E8 782 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 MLXIPQ9HAP2 919 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 SETD4Q9NVD3 440 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 ZNF213O14771 459 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 KDM4AO75164 1064 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 UBA1P22314 1058 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 CTNNB1P35222 781 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 BMPR1AP36894 532 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 HSD17B4P51659 736 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 HYAL1Q12794 435 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 PGM5Q15124 567 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 IER5LQ5T953 404 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 STOX1Q6ZVD7 989 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 IL31RAQ8NI17 732 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-220ENST00000576940 LINC01565O15544 149 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 NCK2O43639 380 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 LGALS2P05162 132 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 LINC00271P0C7V0 271 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 HOXC8P31273 242 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 PDE1AP54750 535 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ASPRV1Q53RT3 343 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 HERC4Q5GLZ8 1057 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 PRSS33Q8NF86 280 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 SNX27Q96L92 541 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 AMNQ9BXJ7 453 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ALG13Q9NP73 1137 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 ZMYM6O95789 1325 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
NPLOC4-220ENST00000576940 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 B4E1Z4 1266 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 C5orf67F2Z3F1 127 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 STXBP3O00186 592 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 ENPP3O14638 875 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 TBX10O75333 385 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 CHRNA1P02708 482 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 RB1P06400 928 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 TGFB3P10600 412 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 CAMK1Q14012 370 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 EDAQ92838 391 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 RTEL1Q9NZ71 1219 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 PCDHA1Q9Y5I3 950 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 TECTAO75443 2155 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 NLRC5Q86WI3 1866 aa11.76□□□□□ -0.53
NPLOC4-220ENST00000576940 GHRHRQ02643 423 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 ADAM15Q13444 863 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 CCDC178Q5BJE1 867 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 FAM26DQ5JW98 314 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 UTP14CQ5TAP6 766 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 CYFIP1Q7L576 1253 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 APBB2Q92870 758 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 RILPL2Q969X0 211 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 PBXIP1Q96AQ6 731 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 LMAN2LQ9H0V9 348 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 MAP3K20Q9NYL2 800 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 MYH6P13533 1939 aa11.75□□□□□ -0.53
NPLOC4-220ENST00000576940 KLRF2D3W0D1 207 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 NOP56O00567 594 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 ZBTB5O15062 677 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 CAND2O75155 1236 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 GHRP10912 638 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 GNAT1P11488 350 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 SDSP20132 328 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 DNAJB1P25685 340 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 CCND2P30279 289 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 ADAM17P78536 824 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 TRIM50Q86XT4 487 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 MTMR8Q96EF0 704 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 GPR20Q99678 358 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms