RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SERINC5Q86VE9 423 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 ATP6V0A1Q93050 837 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 INPP4AQ96PE3 977 aaPredicted RBP17.56■□□□□ 0.4
CTNS-209ENST00000574776 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 RNPEPQ9H4A4 650 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 TCF20Q9UGU0 1960 aaKnown RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 FRMPD4Q14CM0 1322 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 RSPH10B2B2RC85 870 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 TREHO43280 583 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 LGR5O75473 907 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 STAM2O75886 525 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 DDAH1O94760 285 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 RSPH10BP0C881 870 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 MCM5P33992 734 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 COL9A3Q14050 684 aaPredicted RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 SRBD1Q8N5C6 995 aaKnown RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 CUL5Q93034 780 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 UHRF1Q96T88 793 aaPredicted RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 RAD9AQ99638 391 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
CTNS-209ENST00000574776 TELO2Q9Y4R8 837 aa17.55■□□□□ 0.4
CTNS-209ENST00000574776 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 MEIS2O14770 477 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 FIBPO43427 364 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 LPXNO60711 386 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 EFCAB14O75071 495 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 GJB5O95377 273 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 PLEKHA8P1O95397 391 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 BMP1P13497 986 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 RXRAP19793 462 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 METTL7BQ6UX53 244 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTNS-209ENST00000574776 DBF4BQ8NFT6 615 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 GPR20Q99678 358 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
CTNS-209ENST00000574776 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
CTNS-209ENST00000574776 EMSYQ7Z589 1322 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 MUC3AQ02505 3323 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 DOCK5Q9H7D0 1870 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 PIK3CDO00329 1044 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 SH2B2O14492 632 aaPredicted RBP17.53■□□□□ 0.4
CTNS-209ENST00000574776 SLC27A2O14975 620 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 GNAQP50148 359 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 SP4Q02446 784 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
CTNS-209ENST00000574776 PCNX4Q63HM2 1172 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 TMEM87BQ96K49 555 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 BDP1A6H8Y1 2624 aa17.53■□□□□ 0.4
CTNS-209ENST00000574776 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 HOXC8P31273 242 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 KCNQ1P51787 676 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 AAK1Q2M2I8 961 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 NLRX1Q86UT6 975 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 TRIM50Q86XT4 487 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 NECAB3Q96P71 396 aaPredicted RBP17.52■□□□□ 0.4
CTNS-209ENST00000574776 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 LRRC2Q9BYS8 371 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 PSTPIP2Q9H939 334 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 SUGCTQ9HAC7 445 aa17.52■□□□□ 0.4
CTNS-209ENST00000574776 LINC01553A4QN01 128 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 GNAT1P11488 350 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 LIFRP42702 1097 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 ERVK-21P61565 698 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 PLEKHG4Q58EX7 1191 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 CREB3L3Q68CJ9 461 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 TGS1Q96RS0 853 aaKnown RBP17.51■□□□□ 0.39
CTNS-209ENST00000574776 SENP7Q9BQF6 1050 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
CTNS-209ENST00000574776 ATP9AO75110 1047 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 AMHP03971 560 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 CTSHP09668 335 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 CALM1P0DP23 149 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 CALM2P0DP24 149 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 CALM3P0DP25 149 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 MYOCDQ8IZQ8 938 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 FANCBQ8NB91 859 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 SEPT8Q92599 483 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 ZNF215Q9UL58 517 aaPredicted RBP17.5■□□□□ 0.39
CTNS-209ENST00000574776 COG5Q9UP83 839 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 INSL6Q9Y581 213 aa17.5■□□□□ 0.39
CTNS-209ENST00000574776 ARHGAP4P98171 946 aa17.49■□□□□ 0.39
CTNS-209ENST00000574776 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
CTNS-209ENST00000574776 UBE2SQ16763 222 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms