RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.17□□□□□ -1.26
CDC27-216ENST00000574304 SRGAP2CP0DJJ0 459 aa7.17□□□□□ -1.26
CDC27-216ENST00000574304 TUSC3Q13454 348 aa7.17□□□□□ -1.26
CDC27-216ENST00000574304 SAPCD2Q86UD0 394 aa7.17□□□□□ -1.26
CDC27-216ENST00000574304 ZC3H7AQ8IWR0 971 aaKnown RBP7.17□□□□□ -1.26
CDC27-216ENST00000574304 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
CDC27-216ENST00000574304 ZBTB8AQ96BR9 441 aa7.17□□□□□ -1.26
CDC27-216ENST00000574304 NCOA5Q9HCD5 579 aaKnown RBP7.17□□□□□ -1.26
CDC27-216ENST00000574304 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 RASGRP1O95267 797 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 LRG1P02750 347 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 APPP05067 770 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 BMP7P18075 431 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 GRIN1Q05586 938 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 SMAD4Q13485 552 aaKnown RBP7.16□□□□□ -1.26
CDC27-216ENST00000574304 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 TP53I13Q8NBR0 393 aaPredicted RBP7.16□□□□□ -1.26
CDC27-216ENST00000574304 TTLL11Q8NHH1 800 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 ZNF526Q8TF50 670 aaPredicted RBP7.16□□□□□ -1.26
CDC27-216ENST00000574304 CLEC4DQ8WXI8 215 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 MAGEB10Q96LZ2 347 aaPredicted RBP7.16□□□□□ -1.26
CDC27-216ENST00000574304 C11orf84Q9BUA3 381 aaPredicted RBP7.16□□□□□ -1.26
CDC27-216ENST00000574304 CATSPERZQ9NTU4 200 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
CDC27-216ENST00000574304 SH3D21A4FU49 640 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 PLD2O14939 933 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 KCNQ2O43526 872 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 TRIM13O60858 407 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 LTFP02788 710 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 PYGMP11217 842 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 ITGA1P56199 1179 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 ST5P78524 1137 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 DLX2Q07687 328 aaPredicted RBP7.15□□□□□ -1.26
CDC27-216ENST00000574304 GPR19Q15760 415 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 FBLN7Q53RD9 439 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 FAM47CQ5HY64 1035 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 C16orf59Q7L2K0 433 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 BRAPQ7Z569 592 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.15□□□□□ -1.26
CDC27-216ENST00000574304 STK32CQ86UX6 486 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 ADGRG2Q8IZP9 1017 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 KYQ8NBH2 561 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 SCLYQ96I15 445 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 CD244Q9BZW8 370 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 SPATA6Q9NWH7 488 aaPredicted RBP7.15□□□□□ -1.26
CDC27-216ENST00000574304 TELO2Q9Y4R8 837 aa7.15□□□□□ -1.26
CDC27-216ENST00000574304 A0A1B0GTL3 188 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 TCRBV5S4A2TA0A5A2 114 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 GSTA4O15217 222 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 SMARCA5O60264 1052 aaPredicted RBP7.14□□□□□ -1.27
CDC27-216ENST00000574304 PDE6AP16499 860 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 EPHA5P54756 1037 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 ARHGAP36Q6ZRI8 547 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 KCTD1Q719H9 257 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 TTLL6Q8N841 843 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 MARCH10Q8NA82 808 aaPredicted RBP7.14□□□□□ -1.27
CDC27-216ENST00000574304 SH3RF2Q8TEC5 729 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 RNPC3Q96LT9 517 aaKnown RBP7.14□□□□□ -1.27
CDC27-216ENST00000574304 PDGFDQ9GZP0 370 aaPredicted RBP7.14□□□□□ -1.27
CDC27-216ENST00000574304 TRIM39Q9HCM9 518 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 TMEM260Q9NX78 707 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 CBLCQ9ULV8 474 aa7.14□□□□□ -1.27
CDC27-216ENST00000574304 ESYT3A0FGR9 886 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 CCDC66A2RUB6 948 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 RAPGEF3O95398 923 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 THBS2P35442 1172 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 DNM2P50570 870 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 CRY1Q16526 586 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 PAN2Q504Q3 1202 aaKnown RBP7.13□□□□□ -1.27
CDC27-216ENST00000574304 LIPIQ6XZB0 460 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 TTLL7Q6ZT98 887 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 FGD2Q7Z6J4 655 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 OSTM1Q86WC4 334 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 SP8Q8IXZ3 490 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 KCNC2Q96PR1 638 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 KRTAP9-9Q9BYP9 154 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 KRTAP9-4Q9BYQ2 154 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 ZCCHC4Q9H5U6 513 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 HSPBP1Q9NZL4 362 aa7.13□□□□□ -1.27
CDC27-216ENST00000574304 TCRBV16S1A1N1A0A5B0 115 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 AMY2AP04746 511 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 CKMP06732 381 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 FAHP16930 419 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 KRT15P19012 456 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 AMY2BP19961 511 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 SLURP1P55000 103 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 ADAM9Q13443 819 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 FNDC3BQ53EP0 1204 aaKnown RBP7.12□□□□□ -1.27
CDC27-216ENST00000574304 NLGN4XQ8N0W4 816 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 CARFQ8N187 725 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 CLUHP3Q96NS8 147 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 PARD6AQ9NPB6 346 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 LUC7LQ9NQ29 371 aaKnown RBP7.12□□□□□ -1.27
CDC27-216ENST00000574304 NTMQ9P121 344 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 SRPK3Q9UPE1 567 aa7.12□□□□□ -1.27
CDC27-216ENST00000574304 MAN2B1O00754 1011 aa7.11□□□□□ -1.27
CDC27-216ENST00000574304 PPP1R12AO14974 1030 aaPredicted RBP7.11□□□□□ -1.27
CDC27-216ENST00000574304 SASH1O94885 1247 aa7.11□□□□□ -1.27
CDC27-216ENST00000574304 ASMTLO95671 621 aa7.11□□□□□ -1.27
CDC27-216ENST00000574304 INHBBP09529 407 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms