RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 TDHQ8IZJ6 230 aa31.71■■■□□ 2.67
SCARF1-207ENST00000573867 CCDC148Q8NFR7 591 aa31.71■■■□□ 2.67
SCARF1-207ENST00000573867 GPR20Q99678 358 aa31.71■■■□□ 2.67
SCARF1-207ENST00000573867 C16orf70Q9BSU1 422 aa31.71■■■□□ 2.67
SCARF1-207ENST00000573867 PKD2L1Q9P0L9 805 aa31.71■■■□□ 2.67
SCARF1-207ENST00000573867 GNA11P29992 359 aa31.7■■■□□ 2.67
SCARF1-207ENST00000573867 ST3GAL1Q11201 340 aa31.7■■■□□ 2.67
SCARF1-207ENST00000573867 NPY5RQ15761 445 aa31.7■■■□□ 2.67
SCARF1-207ENST00000573867 C22orf23Q9BZE7 217 aa31.7■■■□□ 2.67
SCARF1-207ENST00000573867 ARP10275 920 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 CYP2C9P11712 490 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 SP4Q02446 784 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 GTF3C6Q969F1 213 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 CDHR1Q96JP9 859 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 CTAGE1Q96RT6 745 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 NOC4LQ9BVI4 516 aaKnown RBP31.69■■■□□ 2.66
SCARF1-207ENST00000573867 STK36Q9NRP7 1315 aa31.69■■■□□ 2.66
SCARF1-207ENST00000573867 EDIL3O43854 480 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 CYP2C18P33260 490 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 NLRP5P59047 1200 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 PTPN11Q06124 597 aaPredicted RBP31.68■■■□□ 2.66
SCARF1-207ENST00000573867 MFSD10Q14728 455 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 CEP55Q53EZ4 464 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 C9orf50Q5SZB4 431 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 ALG1Q9BT22 464 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 HIPK3Q9H422 1215 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 KCNH7Q9NS40 1196 aa31.68■■■□□ 2.66
SCARF1-207ENST00000573867 FAM86B1E9PN63 330 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 MEIS1O00470 390 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 SOX1O00570 391 aaPredicted RBP31.67■■■□□ 2.66
SCARF1-207ENST00000573867 LGALS2P05162 132 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 FAM86B2P0C5J1 330 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 RBM25P49756 843 aaKnown RBP31.67■■■□□ 2.66
SCARF1-207ENST00000573867 KIAA0753Q2KHM9 967 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 GDF6Q6KF10 455 aaPredicted RBP31.67■■■□□ 2.66
SCARF1-207ENST00000573867 MFSD5Q6N075 450 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 SESTD1Q86VW0 696 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 GJB4Q9NTQ9 266 aa31.67■■■□□ 2.66
SCARF1-207ENST00000573867 LAMA2P24043 3122 aaKnown RBP31.67■■■□□ 2.66
SCARF1-207ENST00000573867 NOP56O00567 594 aaKnown RBP31.66■■■□□ 2.66
SCARF1-207ENST00000573867 CDKL5O76039 1030 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 CYP3A4P08684 503 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 HIC1Q14526 733 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 TRIM50Q86XT4 487 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 BICD2Q8TD16 824 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 WNT8AQ9H1J5 351 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 HDAC6Q9UBN7 1215 aa31.66■■■□□ 2.66
SCARF1-207ENST00000573867 IGLV3-22A0A075B6J6 115 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 M0R2N6 131 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 MAFGO15525 162 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 FDPSP14324 419 aaKnown RBP31.65■■■□□ 2.66
SCARF1-207ENST00000573867 FPGSQ05932 587 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 ITGB3BPQ13352 177 aaPredicted RBP31.65■■■□□ 2.66
SCARF1-207ENST00000573867 SHHQ15465 462 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 KATNAL1Q9BW62 490 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 PCDHA4Q9UN74 947 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 KCNJ14Q9UNX9 436 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 SZT2Q5T011 3432 aa31.65■■■□□ 2.66
SCARF1-207ENST00000573867 MCTP2Q6DN12 878 aa31.64■■■□□ 2.66
SCARF1-207ENST00000573867 GIMAP8Q8ND71 665 aaPredicted RBP31.64■■■□□ 2.66
SCARF1-207ENST00000573867 AGO4Q9HCK5 861 aaKnown RBP31.64■■■□□ 2.66
SCARF1-207ENST00000573867 GTF2IRD1Q9UHL9 959 aa31.64■■■□□ 2.66
SCARF1-207ENST00000573867 GSTTP1A0A1W2PQM5 241 aa31.63■■■□□ 2.65
SCARF1-207ENST00000573867 SUPT20HL2P0C7V6 817 aa31.63■■■□□ 2.65
SCARF1-207ENST00000573867 CSF2RAP15509 400 aa31.63■■■□□ 2.65
SCARF1-207ENST00000573867 NSUN7Q8NE18 718 aaKnown RBP31.63■■■□□ 2.65
SCARF1-207ENST00000573867 ORC3Q9UBD5 711 aaPredicted RBP31.63■■■□□ 2.65
SCARF1-207ENST00000573867 H3BRB1 525 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 JAK2O60674 1132 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 ZNF76P36508 570 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 CCL23P55773 120 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 UTP14CQ5TAP6 766 aaKnown RBP31.62■■■□□ 2.65
SCARF1-207ENST00000573867 C16orf59Q7L2K0 433 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 NIPA1Q7RTP0 329 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 DAGLBQ8NCG7 672 aa31.62■■■□□ 2.65
SCARF1-207ENST00000573867 TUT1Q9H6E5 874 aaKnown RBP31.62■■■□□ 2.65
SCARF1-207ENST00000573867 ZNF200P98182 395 aaPredicted RBP31.61■■■□□ 2.65
SCARF1-207ENST00000573867 PTGISQ16647 500 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 PLA2G4DQ86XP0 818 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 BLIDQ8IZY5 108 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 C7orf31Q8N865 590 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 DHX38Q92620 1227 aaKnown RBP31.61■■■□□ 2.65
SCARF1-207ENST00000573867 VWCEQ96DN2 955 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 LRCH3Q96II8 777 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 UIMC1Q96RL1 719 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 PHF20Q9BVI0 1012 aa31.61■■■□□ 2.65
SCARF1-207ENST00000573867 NFASCO94856 1347 aa31.6■■■□□ 2.65
SCARF1-207ENST00000573867 TCF7P36402 384 aaPredicted RBP31.6■■■□□ 2.65
SCARF1-207ENST00000573867 LRIT3Q3SXY7 679 aa31.6■■■□□ 2.65
SCARF1-207ENST00000573867 FAM177A1Q8N128 213 aaPredicted RBP31.6■■■□□ 2.65
SCARF1-207ENST00000573867 CIITAP33076 1130 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 TMEM199Q8N511 208 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 SEPT1Q8WYJ6 367 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 LENG9Q96B70 501 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 SCLYQ96I15 445 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 JPH1Q9HDC5 661 aaPredicted RBP31.59■■■□□ 2.65
SCARF1-207ENST00000573867 LIMCH1Q9UPQ0 1083 aa31.59■■■□□ 2.65
SCARF1-207ENST00000573867 ACRP10323 421 aa31.58■■■□□ 2.65
SCARF1-207ENST00000573867 HOXC8P31273 242 aa31.58■■■□□ 2.65
SCARF1-207ENST00000573867 PPIGQ13427 754 aaKnown RBP eCLIP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms