RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MLXIPQ9HAP2 919 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 YBX2Q9Y2T7 364 aaKnown RBP20.03■□□□□ 0.8
SMG6-214ENST00000573827 V9GY48 417 aaPredicted RBP20.03■□□□□ 0.8
SMG6-214ENST00000573827 GOLGA8AA7E2F4 631 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 ADD1P35611 737 aaKnown RBP20.02■□□□□ 0.8
SMG6-214ENST00000573827 APOBRQ0VD83 1088 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 MBTPS1Q14703 1052 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 PPP1R18Q6NYC8 613 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 Q6ZUG5 572 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 TEX2Q8IWB9 1127 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 AFAP1L1Q8TED9 768 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 GPRASP2Q96D09 838 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 ZNF576Q9H609 170 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 PCDHA6Q9UN73 950 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 PCDHA8Q9Y5H6 950 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 GBF1Q92538 1859 aa20.02■□□□□ 0.8
SMG6-214ENST00000573827 EPB41L2O43491 1005 aaKnown RBP20.01■□□□□ 0.79
SMG6-214ENST00000573827 CXCL10P02778 98 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 CKBP12277 381 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 SELPP16109 830 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 RPS6KB1P23443 525 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 EVCP57679 992 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 PTK7Q13308 1070 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 TCTN1Q2MV58 587 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 RETREG2Q8NC44 543 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 BRF1Q92994 677 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 RIC8AQ9NPQ8 531 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 BARHL2Q9NY43 387 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 NOD1Q9Y239 953 aa20.01■□□□□ 0.79
SMG6-214ENST00000573827 H3BRB1 525 aa20■□□□□ 0.79
SMG6-214ENST00000573827 ADAMTS3O15072 1205 aa20■□□□□ 0.79
SMG6-214ENST00000573827 NBNO60934 754 aa20■□□□□ 0.79
SMG6-214ENST00000573827 CLK2P49760 499 aaKnown RBP20■□□□□ 0.79
SMG6-214ENST00000573827 SERINC5Q86VE9 423 aa20■□□□□ 0.79
SMG6-214ENST00000573827 TRIM50Q86XT4 487 aa20■□□□□ 0.79
SMG6-214ENST00000573827 MTIF3Q9H2K0 278 aaKnown RBP20■□□□□ 0.79
SMG6-214ENST00000573827 TUT1Q9H6E5 874 aaKnown RBP20■□□□□ 0.79
SMG6-214ENST00000573827 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
SMG6-214ENST00000573827 MUC3AQ02505 3323 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 REC8O95072 547 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 RABGGTBP53611 331 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 ADAM17P78536 824 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 NTRK3Q16288 839 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 PKN1Q16512 942 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 BLOC1S2Q6QNY1 142 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 LRRC8DQ7L1W4 858 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 NLRX1Q86UT6 975 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 CYP2W1Q8TAV3 490 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 USP26Q9BXU7 913 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 JADE2Q9NQC1 790 aa19.99■□□□□ 0.79
SMG6-214ENST00000573827 XIRP2A4UGR9 3374 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 GSTTP1A0A1W2PQM5 241 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 SPDYE3A6NKU9 549 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 hCG_1984214I3L0E3 225 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 SMIM10L2AP0DMW4 78 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 SMIM10L2BP0DMW5 78 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 MYOGP15173 224 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMG6-214ENST00000573827 NAPAP54920 295 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 RAB30Q15771 203 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 PFKFB3Q16875 520 aaPredicted RBP19.98■□□□□ 0.79
SMG6-214ENST00000573827 CCDC155Q8N6L0 562 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 ZNF713Q8N859 430 aaPredicted RBP19.98■□□□□ 0.79
SMG6-214ENST00000573827 CRYGNQ8WXF5 182 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 RNPEPQ9H4A4 650 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 PTPRSQ13332 1948 aa19.98■□□□□ 0.79
SMG6-214ENST00000573827 NOP56O00567 594 aaKnown RBP19.97■□□□□ 0.79
SMG6-214ENST00000573827 ATP2A2P16615 1042 aaKnown RBP19.97■□□□□ 0.79
SMG6-214ENST00000573827 MKRN4PQ13434 485 aaPredicted RBP19.97■□□□□ 0.79
SMG6-214ENST00000573827 ZNF618Q5T7W0 954 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 CDHR1Q96JP9 859 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 PGBD1Q96JS3 809 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 NKX2-4Q9H2Z4 354 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 ZSWIM6Q9HCJ5 1215 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 PCDHA11Q9Y5I1 949 aa19.97■□□□□ 0.79
SMG6-214ENST00000573827 NCOR1O75376 2440 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 SMCO2A6NFE2 343 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 ZBBXA8MT70 800 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 TREHO43280 583 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 SREBF1P36956 1147 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 ADCY7P51828 1080 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 MTMR1Q13613 665 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 TOB2Q14106 344 aaPredicted RBP19.96■□□□□ 0.79
SMG6-214ENST00000573827 ADGRE1Q14246 886 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 GIMAP8Q8ND71 665 aaPredicted RBP19.96■□□□□ 0.79
SMG6-214ENST00000573827 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 TMEM260Q9NX78 707 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 MSRAQ9UJ68 235 aa19.96■□□□□ 0.79
SMG6-214ENST00000573827 ESYT2A0FGR8 921 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 C17orf102A2RUQ5 167 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 MAFGO15525 162 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 BAIAP3O94812 1187 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 ARHGEF15O94989 841 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 FOSP01100 380 aaPredicted RBP19.95■□□□□ 0.78
SMG6-214ENST00000573827 SCG2P13521 617 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 FOSL2P15408 326 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 PDIA3P30101 505 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms