RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	AP3B2	Q13367	1082 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	C16orf59	Q7L2K0	433 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	CAGE1	Q8TC20	777 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	TM6SF1	Q9BZW5	370 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	ZNF215	Q9UL58	517 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-222	ENST00000573667		H3BRB1	525 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	PRPF3	O43395	683 aa	Known RBP	13.66	□□□□□ -0.22
ABR-222	ENST00000573667	LGALS2	P05162	132 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	IQCF3	P0C7M6	154 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	ACTN1	P12814	892 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	CCT2	P78371	535 aa	Known RBP	13.66	□□□□□ -0.22
ABR-222	ENST00000573667	TYW1B	Q6NUM6	668 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	OTOP2	Q7RTS6	562 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	DEFB128	Q7Z7B8	93 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	AFAP1L1	Q8TED9	768 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	HERVK_113	Q902F9	699 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	FAM161B	Q96MY7	647 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	GPR20	Q99678	358 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	C16orf70	Q9BSU1	422 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	RNF26	Q9BY78	433 aa	Predicted RBP	13.66	□□□□□ -0.22
ABR-222	ENST00000573667	ANO3	Q9BYT9	981 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	TUT1	Q9H6E5	874 aa	Known RBP	13.66	□□□□□ -0.22
ABR-222	ENST00000573667	C6orf50	Q9HD87	102 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	JADE2	Q9NQC1	790 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	MTMR10	Q9NXD2	777 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	UBIAD1	Q9Y5Z9	338 aa		13.66	□□□□□ -0.22
ABR-222	ENST00000573667	PTPRS	Q13332	1948 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	C17orf102	A2RUQ5	167 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	ZBBX	A8MT70	800 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	CPLX1	O14810	134 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	ITGB5	P18084	799 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	GNA11	P29992	359 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PDIA3	P30101	505 aa	Known RBP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	ZNF76	P36508	570 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	EVC	P57679	992 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PTK7	Q13308	1070 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	TOB2	Q14106	344 aa	Predicted RBP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	UTP14C	Q5TAP6	766 aa	Known RBP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	MCTP2	Q6DN12	878 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	CPLX2	Q6PUV4	134 aa	Known RBP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	TRIM22	Q8IYM9	498 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	CCDC148	Q8NFR7	591 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	TET1	Q8NFU7	2136 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PHKB	Q93100	1093 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PGBD1	Q96JS3	809 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	MXRA8	Q9BRK3	442 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	SLC26A6	Q9BXS9	759 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	UPF3B	Q9BZI7	483 aa	Known RBP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
ABR-222	ENST00000573667	BCAS3	Q9H6U6	928 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PDRG1	Q9NUG6	133 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	PKD2L1	Q9P0L9	805 aa		13.65	□□□□□ -0.22
ABR-222	ENST00000573667	LOXHD1	Q8IVV2	1947 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	TMEM265	A0A087WTH1	108 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	ESYT2	A0FGR8	921 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	PARN	O95453	639 aa	Known RBP	13.64	□□□□□ -0.23
ABR-222	ENST00000573667	GNAT1	P11488	350 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	KCNA2	P16389	499 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	IFNAR1	P17181	557 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	DNAJB2	P25686	324 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	TCF7	P36402	384 aa	Predicted RBP	13.64	□□□□□ -0.23
ABR-222	ENST00000573667	CLK2	P49760	499 aa	Known RBP	13.64	□□□□□ -0.23
ABR-222	ENST00000573667	RASIP1	Q5U651	963 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	LRRC8D	Q7L1W4	858 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	BICD2	Q8TD16	824 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	ZNF274	Q96GC6	653 aa	Predicted RBP	13.64	□□□□□ -0.23
ABR-222	ENST00000573667	SDF4	Q9BRK5	362 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	ZMYND12	Q9H0C1	365 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	TMEM260	Q9NX78	707 aa		13.64	□□□□□ -0.23
ABR-222	ENST00000573667	MICAL3	Q7RTP6	2002 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	ATP9A	O75110	1047 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	SELP	P16109	830 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	SREBF1	P36956	1147 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	SSRP1	Q08945	709 aa	Known RBP	13.63	□□□□□ -0.23
ABR-222	ENST00000573667	NTRK3	Q16288	839 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	PKN1	Q16512	942 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	JAKMIP3	Q5VZ66	844 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	REXO1	Q8N1G1	1221 aa	Known RBP	13.63	□□□□□ -0.23
ABR-222	ENST00000573667	SEPT1	Q8WYJ6	367 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	ATP6V0A1	Q93050	837 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	NCOA5	Q9HCD5	579 aa	Known RBP	13.63	□□□□□ -0.23
ABR-222	ENST00000573667	MSRA	Q9UJ68	235 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	STXBP5L	Q9Y2K9	1186 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	SLC4A7	Q9Y6M7	1214 aa		13.63	□□□□□ -0.23
ABR-222	ENST00000573667	LAMA2	P24043	3122 aa	Known RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	SMIM10L2A	P0DMW4	78 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	SMIM10L2B	P0DMW5	78 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	CKB	P12277	381 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	ANAPC15	P60006	121 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	ARHGAP4	P98171	946 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	ZNF200	P98182	395 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	RBL2	Q08999	1139 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	STK3	Q13188	491 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	RAB30	Q15771	203 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	CEP55	Q53EZ4	464 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	TRIM50	Q86XT4	487 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	DHX38	Q92620	1227 aa	Known RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	GLG1	Q92896	1179 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	TIFA	Q96CG3	184 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	CTAGE1	Q96RT6	745 aa		13.62	□□□□□ -0.23

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