RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SPATA33Q96N06 139 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 MBOAT7Q96N66 472 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 TBC1D22BQ9NU19 505 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 NFASCO94856 1347 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 MSH4O15457 936 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 SLC37A4O43826 429 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 GAS7O60861 476 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 CPT1AP50416 773 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 BEX3Q00994 111 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 RESTQ13127 1097 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 CALCRLQ16602 461 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 PCSK9Q8NBP7 692 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 LENG9Q96B70 501 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 TEKT3Q9BXF9 490 aa16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 JPH1Q9HDC5 661 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-209ENST00000572760 TBX3O15119 743 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 ADAMTS4O75173 837 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 FARP2O94887 1054 aaPredicted RBP16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 F13A1P00488 732 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 NBR1Q14596 966 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 LRRC41Q15345 812 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 LRCH2Q5VUJ6 765 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 SLFN12Q8IYM2 578 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 AFG1LQ8WV93 481 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 FAM20AQ96MK3 541 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 CRISPLD2Q9H0B8 497 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 PCDHB6Q9Y5E3 794 aa16.41■□□□□ 0.22
NPLOC4-209ENST00000572760 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 WNT7AO00755 349 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 MYL3P08590 195 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 SOX10P56693 466 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 NUCB2P80303 420 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 ITGB3BPQ13352 177 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 PKP1Q13835 747 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 EMID1Q96A84 441 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 RIT2Q99578 217 aa16.4■□□□□ 0.22
NPLOC4-209ENST00000572760 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 DNM1LO00429 736 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 MMP3P08254 477 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 TXKP42681 527 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 KRT76Q01546 638 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 KCNA10Q16322 511 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 DGKDQ16760 1214 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 HSDL1Q3SXM5 330 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 ETNPPLQ8TBG4 499 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 GJA10Q969M2 543 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 ZNF396Q96N95 335 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
NPLOC4-209ENST00000572760 MOXD2PA6NHM9 499 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 A6NJR5 290 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 CHMP2AO43633 222 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 KPNA6O60684 536 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 PPFIA4O75335 1185 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 BRD1O95696 1058 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 CST5P28325 142 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 PTGDRQ13258 359 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 FOXD4L6Q3SYB3 417 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 FOXD4L3Q6VB84 417 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 GPR20Q99678 358 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 HTTP42858 3142 aa16.38■□□□□ 0.21
NPLOC4-209ENST00000572760 LAD1O00515 517 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 CTAGE5O15320 804 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 BMP15O95972 392 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 ASGR1P07306 291 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 ACLYP53396 1101 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 ACTR2P61160 394 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms