RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 RSPH10B2B2RC85 870 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 MEIS2O14770 477 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 TREHO43280 583 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 EFCAB14O75071 495 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 STAM2O75886 525 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 RSPH10BP0C881 870 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 ERVK-21P61565 698 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 FAM117BQ6P1L5 589 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 USP17L6PQ6QN14 398 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 METTL7BQ6UX53 244 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 CYFIP1Q7L576 1253 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 ZNF654Q8IZM8 581 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 TET1Q8NFU7 2136 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 GDPD5Q8WTR4 605 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 ATP6V0A1Q93050 837 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 NEDD9Q14511 834 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 AAK1Q2M2I8 961 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 GNPTABQ3T906 1256 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 PLEKHG4Q58EX7 1191 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 TRIM50Q86XT4 487 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 USP26Q9BXU7 913 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 MTUS1Q9ULD2 1270 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 COG5Q9UP83 839 aa20.27■□□□□ 0.84
CIITA-206ENST00000571190 XIRP2A4UGR9 3374 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 PIK3CDO00329 1044 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 FIBPO43427 364 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 DDAH1O94760 285 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 PLEKHA8P1O95397 391 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 ADAM17P78536 824 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 SRBD1Q8N5C6 995 aaKnown RBP20.26■□□□□ 0.83
CIITA-206ENST00000571190 TGS1Q96RS0 853 aaKnown RBP20.26■□□□□ 0.83
CIITA-206ENST00000571190 SETD4Q9NVD3 440 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 LMCD1Q9NZU5 365 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 EMSYQ7Z589 1322 aa20.26■□□□□ 0.83
CIITA-206ENST00000571190 NOP56O00567 594 aaKnown RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 PRC1O43663 620 aa20.25■□□□□ 0.83
CIITA-206ENST00000571190 COL9A1P20849 921 aa20.25■□□□□ 0.83
CIITA-206ENST00000571190 HTRA4P83105 476 aaPredicted RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
CIITA-206ENST00000571190 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 CTCFLQ8NI51 663 aaPredicted RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 HLA-CQ95604 372 aa20.25■□□□□ 0.83
CIITA-206ENST00000571190 RRP36Q96EU6 259 aaKnown RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
CIITA-206ENST00000571190 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
CIITA-206ENST00000571190 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
CIITA-206ENST00000571190 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
CIITA-206ENST00000571190 SP7Q8TDD2 431 aaPredicted RBP20.24■□□□□ 0.83
CIITA-206ENST00000571190 SENP7Q9BQF6 1050 aa20.24■□□□□ 0.83
CIITA-206ENST00000571190 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 ATP9AO75110 1047 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 CTSHP09668 335 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 RXRAP19793 462 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 KIF5BP33176 963 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 UTP14CQ5TAP6 766 aaKnown RBP20.23■□□□□ 0.83
CIITA-206ENST00000571190 XRRA1Q6P2D8 792 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 MYOCDQ8IZQ8 938 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 C17orf80Q9BSJ5 609 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 RAPGEFL1Q9UHV5 662 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 REV3LO60673 3130 aa20.23■□□□□ 0.83
CIITA-206ENST00000571190 PRRC2BQ5JSZ5 2229 aaKnown RBP20.22■□□□□ 0.83
CIITA-206ENST00000571190 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.22■□□□□ 0.83
CIITA-206ENST00000571190 SLC27A2O14975 620 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 CAND2O75155 1236 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 AMHP03971 560 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 SP4Q02446 784 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 CASC1Q6TDU7 716 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 LMBR1Q8WVP7 490 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 CUL5Q93034 780 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 LZTS2Q9BRK4 669 aa20.22■□□□□ 0.83
CIITA-206ENST00000571190 MYO9BQ13459 2157 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 hCG_1642624A0A1W2PR95 340 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 KCNA2P16389 499 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 ITGB5P18084 799 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 MCM5P33992 734 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 GNAQP50148 359 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 FAM26DQ5JW98 314 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 SEPT8Q92599 483 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 TOP1MTQ969P6 601 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 TMEM87BQ96K49 555 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
CIITA-206ENST00000571190 GNAT1P11488 350 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 LIFRP42702 1097 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 NFXL1Q6ZNB6 911 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 PSTPIP2Q9H939 334 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
CIITA-206ENST00000571190 ZNF215Q9UL58 517 aaPredicted RBP20.2■□□□□ 0.82
CIITA-206ENST00000571190 UBIAD1Q9Y5Z9 338 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 TRANK1O15050 2925 aa20.2■□□□□ 0.82
CIITA-206ENST00000571190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.19■□□□□ 0.82
CIITA-206ENST00000571190 GSTTP1A0A1W2PQM5 241 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms