RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 JAKMIP3Q5VZ66 844 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 FAM177A1Q8N128 213 aaPredicted RBP12.73□□□□□ -0.37
SMG6-206ENST00000570668 REXO1Q8N1G1 1221 aaKnown RBP12.73□□□□□ -0.37
SMG6-206ENST00000570668 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 GPR20Q99678 358 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
SMG6-206ENST00000570668 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
SMG6-206ENST00000570668 MEIS1O00470 390 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
SMG6-206ENST00000570668 CDKL5O76039 1030 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 ZNF286BP0CG31 522 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 EPHB4P54760 987 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 MFSD10Q14728 455 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 KIAA0753Q2KHM9 967 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 TMEM199Q8N511 208 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 CYP2W1Q8TAV3 490 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 KCNH7Q9NS40 1196 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
SMG6-206ENST00000570668 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 LGALS2P05162 132 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 CYP3A4P08684 503 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 CYP2C9P11712 490 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 CYP2C18P33260 490 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 NLRP5P59047 1200 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 PPIGQ13427 754 aaKnown RBP eCLIP12.71□□□□□ -0.375e-6■■□□□ 13.2
SMG6-206ENST00000570668 SHHQ15465 462 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 ME3Q16798 604 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 C9orf50Q5SZB4 431 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 NIPA1Q7RTP0 329 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 C7orf31Q8N865 590 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 GTF2IRD1Q9UHL9 959 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 TELO2Q9Y4R8 837 aa12.71□□□□□ -0.37
SMG6-206ENST00000570668 UMODL1Q5DID0 1318 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 H3BRB1 525 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 SOX1O00570 391 aaPredicted RBP12.7□□□□□ -0.38
SMG6-206ENST00000570668 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 ARP10275 920 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 CSF2RAP15509 400 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 ZNF76P36508 570 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 PTGISQ16647 500 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 GDF6Q6KF10 455 aaPredicted RBP12.7□□□□□ -0.38
SMG6-206ENST00000570668 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 GTF3C6Q969F1 213 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 KIF2CQ99661 725 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
SMG6-206ENST00000570668 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
SMG6-206ENST00000570668 NFASCO94856 1347 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 FAM86B1E9PN63 330 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 SLC34A2O95436 690 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 LARGE1O95461 756 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 FAM86B2P0C5J1 330 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 CIITAP33076 1130 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 RBM25P49756 843 aaKnown RBP12.69□□□□□ -0.38
SMG6-206ENST00000570668 SP4Q02446 784 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 NPY5RQ15761 445 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 C16orf59Q7L2K0 433 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 SEPT1Q8WYJ6 367 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 AGO4Q9HCK5 861 aaKnown RBP12.69□□□□□ -0.38
SMG6-206ENST00000570668 JPH1Q9HDC5 661 aaPredicted RBP12.69□□□□□ -0.38
SMG6-206ENST00000570668 IL23AQ9NPF7 189 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 PKD2L1Q9P0L9 805 aa12.69□□□□□ -0.38
SMG6-206ENST00000570668 M0R2N6 131 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 HOXC8P31273 242 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
SMG6-206ENST00000570668 USP11P51784 963 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 CCL23P55773 120 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 RBL2Q08999 1139 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
SMG6-206ENST00000570668 BFSP2Q13515 415 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 UTP14CQ5TAP6 766 aaKnown RBP12.68□□□□□ -0.38
SMG6-206ENST00000570668 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 PLA2G4DQ86XP0 818 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 BLIDQ8IZY5 108 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 CAGE1Q8TC20 777 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.68□□□□□ -0.388e-7■■■■■ 32.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms