RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SGSM2O43147 1006 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 TREHO43280 583 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 LGR5O75473 907 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 GJB5O95377 273 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 LGALS2P05162 132 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SMIM10L2AP0DMW4 78 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SMIM10L2BP0DMW5 78 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 RXRAP19793 462 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 POU3F3P20264 500 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SEMA3FQ13275 785 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 USP17L6PQ6QN14 398 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SERINC5Q86VE9 423 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 MYOCDQ8IZQ8 938 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 RNPEPQ9H4A4 650 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 TUT1Q9H6E5 874 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 RBM8AQ9Y5S9 174 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 DOCK5Q9H7D0 1870 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 UPP2O95045 317 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 TGFB3P10600 412 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 AAK1Q2M2I8 961 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 MB21D2Q8IYB1 491 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 ZNF654Q8IZM8 581 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 SAMD3Q8N6K7 520 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 HLA-CQ95604 372 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 TGS1Q96RS0 853 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 RAD9AQ99638 391 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 C17orf80Q9BSJ5 609 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
CTDNEP1-203ENST00000570385 SPATA31C2B4DYI2 1134 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 FIBPO43427 364 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 PRC1O43663 620 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 AMHP03971 560 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 ERVK-21P61565 698 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 TRAF1Q13077 416 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 NEDD9Q14511 834 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 METTL7BQ6UX53 244 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 NFXL1Q6ZNB6 911 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 RRP36Q96EU6 259 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 INPP4AQ96PE3 977 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 GPR20Q99678 358 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 LRRC2Q9BYS8 371 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 EPHX3Q9H6B9 360 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-203ENST00000570385 EMSYQ7Z589 1322 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 MEIS2O14770 477 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 EFCAB14O75071 495 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 MARK3P27448 753 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 ICAM3P32942 547 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 ARHGAP4P98171 946 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 UBE2SQ16763 222 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 SRBD1Q8N5C6 995 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 SEPT8Q92599 483 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 CUL5Q93034 780 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 SEC63Q9UGP8 760 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 COG5Q9UP83 839 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 INSL6Q9Y581 213 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 REV3LO60673 3130 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 MICAL3Q7RTP6 2002 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 KAT6AQ92794 2004 aa9.92□□□□□ -0.82
CTDNEP1-203ENST00000570385 FRMPD4Q14CM0 1322 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 CCDC69A6NI79 296 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 SH2B2O14492 632 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 ATP9AO75110 1047 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 DDAH1O94760 285 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 HOXC8P31273 242 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 KIF5BP33176 963 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 PCNX4Q63HM2 1172 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 RUFY4Q6ZNE9 571 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 SKAP1Q86WV1 359 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 LMBR1Q8WVP7 490 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 YME1L1Q96TA2 773 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 SPZ1Q9BXG8 430 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 PSTPIP2Q9H939 334 aa9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 ZNF215Q9UL58 517 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-203ENST00000570385 TRANK1O15050 2925 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 SLC27A2O14975 620 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 STAM2O75886 525 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 CSPG5O95196 566 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 CHRNA1P02708 482 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 GHRP10912 638 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms