RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ZBTB17Q13105 803 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 FAM180BQ6P0A1 224 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 VPS52Q8N1B4 723 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 RMDN2Q96LZ7 410 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 CAPS2Q9BXY5 557 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 MCOLN1Q9GZU1 580 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 MROH8Q9H579 483 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 TDRD3Q9H7E2 651 aaKnown RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 AASDHPPTQ9NRN7 309 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 ATP8A2Q9NTI2 1148 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 COL1A1P02452 1464 aaPredicted RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 ESYT3A0FGR9 886 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 EFCAB14O75071 495 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 CPA1P15085 419 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 MSNP26038 577 aaKnown RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 COPAP53621 1224 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 RILPL1Q5EBL4 403 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 TTC19Q6DKK2 380 aaPredicted RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 ESR2Q92731 530 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 OPTNQ96CV9 577 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 BRINP2Q9C0B6 783 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 KAT14Q9H8E8 782 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 ZNF304Q9HCX3 659 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 SERPINB13Q9UIV8 391 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 DBNLQ9UJU6 430 aaKnown RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 FLOT1O75955 427 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 HMGCRP04035 888 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 RAG1P15918 1043 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 FAM47CQ5HY64 1035 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 TMEM179Q6ZVK1 233 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 ANKLE1Q8NAG6 615 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 JAKMIP2Q96AA8 810 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 FAM227BQ96M60 508 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 FRMD6Q96NE9 622 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 PRDM5Q9NQX1 630 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 BHMG1C9JSJ3 638 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 VIMP08670 466 aaKnown RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 DBN1Q16643 649 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 TMEM95Q3KNT9 176 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 RCSD1Q6JBY9 416 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 DNAJB7Q7Z6W7 309 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 AMIGO3Q86WK7 504 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 BRSK2Q8IWQ3 736 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 KCT2Q8NC54 265 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 DHRS1Q96LJ7 313 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 VPS45Q9NRW7 570 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 KLRG2A4D1S0 409 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 ZNF280AP59817 542 aaPredicted RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 IRGCQ6NXR0 463 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 CWC27Q6UX04 472 aaKnown RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 TRIM22Q8IYM9 498 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 IFNL3Q8IZI9 196 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 SPATA5Q8NB90 893 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 SH3TC2Q8TF17 1288 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 FRS2Q8WU20 508 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 KRT23Q9C075 422 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 TSR3Q9UJK0 312 aaKnown RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
SMG1-217ENST00000569764 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 FAM205AQ6ZU69 1335 aa7.36□□□□□ -1.23
SMG1-217ENST00000569764 NOP56O00567 594 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 SGTAO43765 313 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TAF5LO75529 589 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 GFPT2O94808 682 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 PSMA5P28066 241 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 CLK2P49760 499 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 BFSP2Q13515 415 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 KRT32Q14532 448 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 PREPLQ4J6C6 727 aaPredicted RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 KCNV1Q6PIU1 500 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TCHPQ9BT92 498 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG1-217ENST00000569764 LSG1Q9H089 658 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 TRPC6Q9Y210 931 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 ANKRD36CQ5JPF3 1778 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 CASZ1Q86V15 1759 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 FSD2A1L4K1 749 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 STXBP3O00186 592 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 INPP5BP32019 993 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 NOS2P35228 1153 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 GJA8P48165 433 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 RUFY4Q6ZNE9 571 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 NLRX1Q86UT6 975 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 DESI2Q9BSY9 194 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 BOLA2Q9H3K6 86 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 SEC31BQ9NQW1 1179 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 RNF186Q9NXI6 227 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 RSPH14Q9UHP6 348 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TPCN1Q9ULQ1 816 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 C2CD2Q9Y426 696 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 A0A0B4J203 849 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms