RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ACAD9Q9H845 621 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 KCNH7Q9NS40 1196 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 TPM3P06753 285 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 PLA2G4BP0C869 781 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 FAM43AQ8N2R8 423 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 KCTD17Q8N5Z5 321 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 MB21D1Q8N884 522 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 PURBQ96QR8 312 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 JADE2Q9NQC1 790 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 NRBP1Q9UHY1 535 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 SLC12A3P55017 1021 aa25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 STK4Q13043 487 aa25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 OPTNQ96CV9 577 aa25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 A1CFQ9NQ94 594 aaKnown RBP25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 CYP39A1Q9NYL5 469 aa25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 MAPK8IP1Q9UQF2 711 aa25.18■■□□□ 1.62
VCPKMT-205ENST00000569518 CCDC144BQ3MJ40 725 aa25.17■■□□□ 1.62
VCPKMT-205ENST00000569518 XRRA1Q6P2D8 792 aa25.17■■□□□ 1.62
VCPKMT-205ENST00000569518 DYMQ7RTS9 669 aa25.17■■□□□ 1.62
VCPKMT-205ENST00000569518 AGTPBP1Q9UPW5 1226 aa25.17■■□□□ 1.62
VCPKMT-205ENST00000569518 SERPINC1P01008 464 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 FCER1AP12319 257 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 PTGS1P23219 599 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 UBASH3AP57075 661 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 PLS1Q14651 629 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 HSP90AA4PQ58FG1 418 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 MAP1SQ66K74 1059 aaPredicted RBP25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 KIAA0895Q8NCT3 520 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 TEKT3Q9BXF9 490 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 UNC45AQ9H3U1 944 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 AGO4Q9HCK5 861 aaKnown RBP25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 TUFT1Q9NNX1 390 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 RRAGDQ9NQL2 400 aaPredicted RBP25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 BTBD7Q9P203 1132 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 DHX15O43143 795 aaKnown RBP25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 CBFA2T2O43439 604 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 CYP11B2P19099 503 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 PSMC6P62333 389 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 STIM1Q13586 685 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 ARHGEF16Q5VV41 709 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 CCDC186Q7Z3E2 898 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 CHST13Q8NET6 341 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 KCNF1Q9H3M0 494 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 RGL1Q9NZL6 768 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 CLEC11AQ9Y240 323 aa25.16■■□□□ 1.62
VCPKMT-205ENST00000569518 UNCXA6NJT0 531 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 TRAF5O00463 557 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 GJA5P36382 358 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 CYP4A11Q02928 519 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 APTXQ7Z2E3 356 aaKnown RBP25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 DHTKD1Q96HY7 919 aaPredicted RBP25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 ZNF830Q96NB3 372 aaPredicted RBP25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 NAP1L5Q96NT1 182 aaPredicted RBP25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 ASCC2Q9H1I8 757 aaPredicted RBP25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 INTS13Q9NVM9 706 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 DNM3Q9UQ16 869 aa25.15■■□□□ 1.62
VCPKMT-205ENST00000569518 PSMA7O14818 248 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 CHMP2AO43633 222 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 PPP1R2P41236 205 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 ITGB3BPQ13352 177 aaPredicted RBP25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 MTMR1Q13613 665 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 VSIG10LQ86VR7 867 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 GPBP1Q86WP2 473 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 RIOX2Q8IUF8 465 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 SYT2Q8N9I0 419 aaPredicted RBP25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 HPS3Q969F9 1004 aa25.14■■□□□ 1.62
VCPKMT-205ENST00000569518 COBLO75128 1261 aa25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 SLITRK3O94933 977 aa25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 SSBP05455 408 aaKnown RBP eCLIP25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 MUTP22033 750 aa25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 PMS1P54277 932 aaKnown RBP25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 IRX3P78415 501 aaPredicted RBP25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 ARSHQ5FYA8 562 aa25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 NSUN6Q8TEA1 469 aaKnown RBP25.14■■□□□ 1.61
VCPKMT-205ENST00000569518 MYCLP12524 364 aaPredicted RBP25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 CDK11BP21127 795 aaKnown RBP25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 CCND2P30279 289 aa25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 EPHA7Q15375 998 aa25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 DYDC2Q96IM9 177 aa25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 BMP2KQ9NSY1 1161 aaPredicted RBP25.13■■□□□ 1.61
VCPKMT-205ENST00000569518 FRMD3A2A2Y4 597 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 PEX10O60683 326 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 EYA4O95677 639 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 NR3C2P08235 984 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 IDEP14735 1019 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 HERVK_113P62684 666 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 COASYQ13057 564 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 PSMD2Q13200 908 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 TTI2Q6NXR4 508 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 FASTKD5Q7L8L6 764 aaKnown RBP25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 IMPACTQ9P2X3 320 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 TRIM49BA6NDI0 452 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 CNMDO75829 334 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 CTTNQ14247 550 aaKnown RBP25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 GPAT2Q6NUI2 795 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 SPATC1LQ9H0A9 340 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 SLC39A2Q9NP94 309 aa25.12■■□□□ 1.61
VCPKMT-205ENST00000569518 CCNE1P24864 410 aa25.11■■□□□ 1.61
VCPKMT-205ENST00000569518 MSNP26038 577 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms