RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 FAM205CA6NFA0 338 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 SPATA31C2B4DYI2 1134 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 FAM86B1E9PN63 330 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 NKRFO15226 690 aaKnown RBP eCLIP18.14■□□□□ 0.49
USB1-215ENST00000569252 SEPT4O43236 478 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 MSCO60682 206 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 BRD1O95696 1058 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 FAM86B2P0C5J1 330 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 ZNF865P0CJ78 1059 aaPredicted RBP18.14■□□□□ 0.49
USB1-215ENST00000569252 RARBP10826 455 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 ITGB5P18084 799 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 ICAM3P32942 547 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 MCM7P33993 719 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 RESTQ13127 1097 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 ZNF174Q15697 407 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 TAPT1Q6NXT6 567 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
USB1-215ENST00000569252 CRYGNQ8WXF5 182 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 AP5M1Q9H0R1 490 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 MLXIPQ9HAP2 919 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
USB1-215ENST00000569252 KCNH7Q9NS40 1196 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 CHMP5Q9NZZ3 219 aa18.14■□□□□ 0.49
USB1-215ENST00000569252 RBM47A0AV96 593 aaKnown RBP18.13■□□□□ 0.49
USB1-215ENST00000569252 NEMFO60524 1076 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 TDP2O95551 362 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 BMP15O95972 392 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 CYBAP13498 195 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 ADCYAP1R1P41586 468 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 SHHQ15465 462 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 CALCRLQ16602 461 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 BRDTQ58F21 947 aaPredicted RBP18.13■□□□□ 0.49
USB1-215ENST00000569252 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
USB1-215ENST00000569252 CYP2W1Q8TAV3 490 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 FERMT2Q96AC1 680 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
USB1-215ENST00000569252 PDGFCQ9NRA1 345 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 DDX41Q9UJV9 622 aaKnown RBP18.13■□□□□ 0.49
USB1-215ENST00000569252 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
USB1-215ENST00000569252 IGHA2P01877 340 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 LAMC2Q13753 1193 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 PKP1Q13835 747 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 FOXD4L6Q3SYB3 417 aaPredicted RBP18.12■□□□□ 0.49
USB1-215ENST00000569252 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 DUSP28Q4G0W2 176 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 FOXD4L3Q6VB84 417 aaPredicted RBP18.12■□□□□ 0.49
USB1-215ENST00000569252 SLFN12Q8IYM2 578 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 AGO4Q9HCK5 861 aaKnown RBP18.12■□□□□ 0.49
USB1-215ENST00000569252 TBC1D22BQ9NU19 505 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 PKD2L1Q9P0L9 805 aa18.12■□□□□ 0.49
USB1-215ENST00000569252 IPO5O00410 1097 aaKnown RBP18.11■□□□□ 0.49
USB1-215ENST00000569252 TBX3O15119 743 aa18.11■□□□□ 0.49
USB1-215ENST00000569252 DUSP11O75319 330 aaKnown RBP18.11■□□□□ 0.49
USB1-215ENST00000569252 GH1P01241 217 aa18.11■□□□□ 0.49
USB1-215ENST00000569252 ARP10275 920 aa18.11■□□□□ 0.49
USB1-215ENST00000569252 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
USB1-215ENST00000569252 KATNBL1Q9H079 304 aa18.11■□□□□ 0.49
USB1-215ENST00000569252 Q9Y3F1 56 aa18.11■□□□□ 0.49
USB1-215ENST00000569252 IGLV3-22A0A075B6J6 115 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 LAD1O00515 517 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 NOP56O00567 594 aaKnown RBP18.1■□□□□ 0.49
USB1-215ENST00000569252 DYNC1LI2O43237 492 aaPredicted RBP18.1■□□□□ 0.49
USB1-215ENST00000569252 GAS7O60861 476 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 RGS20O76081 388 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 SMPD1P17405 629 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 ITGB8P26012 769 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 TOB1P50616 345 aaPredicted RBP18.1■□□□□ 0.49
USB1-215ENST00000569252 CEBPZQ03701 1054 aaKnown RBP18.1■□□□□ 0.49
USB1-215ENST00000569252 SF3A1Q15459 793 aaKnown RBP18.1■□□□□ 0.49
USB1-215ENST00000569252 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 BADQ92934 168 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 MBOAT7Q96N66 472 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
USB1-215ENST00000569252 DNM1LO00429 736 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 MSH4O15457 936 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 ZEB2O60315 1214 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 GGPS1O95749 300 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
USB1-215ENST00000569252 PTGDRQ13258 359 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 TMEM266Q2M3C6 531 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 CELF3Q5SZQ8 465 aaKnown RBP18.09■□□□□ 0.49
USB1-215ENST00000569252 LRCH2Q5VUJ6 765 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 CYFIP1Q7L576 1253 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 RIT2Q99578 217 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 CDX2Q99626 313 aaPredicted RBP18.09■□□□□ 0.49
USB1-215ENST00000569252 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 RAB34Q9BZG1 259 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
USB1-215ENST00000569252 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.08■□□□□ 0.48
USB1-215ENST00000569252 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
USB1-215ENST00000569252 SLC37A4O43826 429 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms