RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 SOD2P04179 222 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 CELA3BP08861 270 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 GNAT1P11488 350 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 SSRP1Q08945 709 aaKnown RBP4.77□□□□□ -1.65
BBS4-215ENST00000569001 TUSC3Q13454 348 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 STYK1Q6J9G0 422 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 OTOP3Q7RTS5 596 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 PRRT2Q7Z6L0 340 aaPredicted RBP4.77□□□□□ -1.65
BBS4-215ENST00000569001 TTLL6Q8N841 843 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 EXOC2Q96KP1 924 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 SLC6A20Q9NP91 592 aa4.77□□□□□ -1.65
BBS4-215ENST00000569001 KRIT1O00522 736 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 ZNF28P17035 718 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 GPR85P60893 370 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 PROSER1Q86XN7 944 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 ZCCHC14Q8WYQ9 949 aaKnown RBP4.76□□□□□ -1.65
BBS4-215ENST00000569001 CDC6Q99741 560 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 SMOC1Q9H4F8 434 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 PCDHA8Q9Y5H6 950 aa4.76□□□□□ -1.65
BBS4-215ENST00000569001 TRBV23-1A0A0A0MS06 115 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 TCRBV5S4A2TA0A5A2 114 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 KCNK3O14649 394 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 C6orf222P0C671 652 aaPredicted RBP4.75□□□□□ -1.65
BBS4-215ENST00000569001 SRGAP2CP0DJJ0 459 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 IL13P35225 146 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 GLRBP48167 497 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 RASGRF1Q13972 1273 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 KIZQ2M2Z5 673 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 RSPO2Q6UXX9 243 aaPredicted RBP4.75□□□□□ -1.65
BBS4-215ENST00000569001 IFNL3Q8IZI9 196 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 PMFBP1Q8TBY8 1022 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 SH3RF2Q8TEC5 729 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 CLIC6Q96NY7 704 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 INVSQ9Y283 1065 aa4.75□□□□□ -1.65
BBS4-215ENST00000569001 KDM2BQ8NHM5 1336 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 MROH6A6NGR9 719 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 CYP1A1P04798 512 aaPredicted RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 CKMP06732 381 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 KRT15P19012 456 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 NFKB2Q00653 900 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 RASA3Q14644 834 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 PAN2Q504Q3 1202 aaKnown RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 ZFYVE27Q5T4F4 411 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 MTDHQ86UE4 582 aaKnown RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 UHMK1Q8TAS1 419 aaKnown RBP4.74□□□□□ -1.65
BBS4-215ENST00000569001 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.74□□□□□ -1.65
BBS4-215ENST00000569001 PHOSPHO1Q8TCT1 267 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 DEPDC7Q96QD5 511 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 L2HGDHQ9H9P8 463 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 SNTG2Q9NY99 539 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 DSEQ9UL01 958 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 PCDHA9Q9Y5H5 950 aa4.74□□□□□ -1.65
BBS4-215ENST00000569001 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.73□□□□□ -1.65
BBS4-215ENST00000569001 ACOT7O00154 380 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 B4GALT3O60512 393 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 PYGMP11217 842 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 SPIRE1Q08AE8 756 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 SERINC3Q13530 473 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 TBC1D10BQ4KMP7 808 aaPredicted RBP4.73□□□□□ -1.65
BBS4-215ENST00000569001 HABP4Q5JVS0 413 aaKnown RBP4.73□□□□□ -1.65
BBS4-215ENST00000569001 LIMS2Q7Z4I7 341 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 YTHDC1Q96MU7 727 aaKnown RBP4.73□□□□□ -1.65
BBS4-215ENST00000569001 DNAJC7Q99615 494 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 PTPN18Q99952 460 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 ALG1Q9BT22 464 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 CCDC113Q9H0I3 377 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 SLC39A2Q9NP94 309 aa4.73□□□□□ -1.65
BBS4-215ENST00000569001 FAM47E-STBD1D6RA91 191 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 K7ESM1 405 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 MAFKO60675 156 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 COL6A1P12109 1028 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 FAHP16930 419 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 PFKPQ01813 784 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 GUCY1A3Q02108 690 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 SKIDA1Q1XH10 827 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 FAM26FQ5R3K3 315 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 CD276Q5ZPR3 534 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 VASNQ6EMK4 673 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 KCTD1Q719H9 257 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.72□□□□□ -1.65
BBS4-215ENST00000569001 OSTM1Q86WC4 334 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 PTRH1Q86Y79 214 aaKnown RBP4.72□□□□□ -1.65
BBS4-215ENST00000569001 SCUBE1Q8IWY4 988 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 STPG3Q8N7X2 389 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 DTX3Q8N9I9 347 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 PCDH19Q8TAB3 1148 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 MBD6Q96DN6 1003 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 LCORQ96JN0 433 aaPredicted RBP4.72□□□□□ -1.65
BBS4-215ENST00000569001 C8orf37Q96NL8 207 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 TMEM209Q96SK2 561 aa4.72□□□□□ -1.65
BBS4-215ENST00000569001 DNAJC2Q99543 621 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms