RNA–Protein interactions for RNA: ENST00000568858.1

CBFB-209, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-209ENST00000568858 SKOR2Q2VWA4 1001 aaPredicted RBP8.68□□□□□ -1.02
CBFB-209ENST00000568858 PRAMEF18Q5VWM3 479 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 KCNT2Q6UVM3 1135 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 OTOP3Q7RTS5 596 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 CDC6Q99741 560 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 SYT3Q9BQG1 590 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 HSPBP1Q9NZL4 362 aa8.68□□□□□ -1.02
CBFB-209ENST00000568858 FAM47E-STBD1D6RA91 191 aa8.67□□□□□ -1.02
CBFB-209ENST00000568858 PRICKLE3O43900 615 aaPredicted RBP8.67□□□□□ -1.02
CBFB-209ENST00000568858 GTF2F1P35269 517 aaKnown RBP eCLIP8.67□□□□□ -1.02
CBFB-209ENST00000568858 ADAM9Q13443 819 aa8.67□□□□□ -1.02
CBFB-209ENST00000568858 PRR31Q5SQ13 230 aa8.67□□□□□ -1.02
CBFB-209ENST00000568858 SCUBE1Q8IWY4 988 aa8.67□□□□□ -1.02
CBFB-209ENST00000568858 DDX1Q92499 740 aaKnown RBP8.67□□□□□ -1.02
CBFB-209ENST00000568858 PPARGC1AQ9UBK2 798 aaKnown RBP8.67□□□□□ -1.02
CBFB-209ENST00000568858 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 CCDC85CA6NKD9 419 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 AQP7O14520 342 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 LRG1P02750 347 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 SOD2P04179 222 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 YOD1Q5VVQ6 348 aaPredicted RBP8.66□□□□□ -1.02
CBFB-209ENST00000568858 SPATC1Q76KD6 591 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 MAMDC2Q7Z304 686 aaPredicted RBP8.66□□□□□ -1.02
CBFB-209ENST00000568858 FERMT3Q86UX7 667 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 LGI4Q8N135 537 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 UHMK1Q8TAS1 419 aaKnown RBP8.66□□□□□ -1.02
CBFB-209ENST00000568858 LCORQ96JN0 433 aaPredicted RBP8.66□□□□□ -1.02
CBFB-209ENST00000568858 L2HGDHQ9H9P8 463 aa8.66□□□□□ -1.02
CBFB-209ENST00000568858 DDX3XO00571 662 aaKnown RBP eCLIP8.65□□□□□ -1.02
CBFB-209ENST00000568858 SLC27A2O14975 620 aa8.65□□□□□ -1.02
CBFB-209ENST00000568858 NAT1P18440 290 aa8.65□□□□□ -1.02
CBFB-209ENST00000568858 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.02
CBFB-209ENST00000568858 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
CBFB-209ENST00000568858 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
CBFB-209ENST00000568858 KCNJ15Q99712 375 aa8.65□□□□□ -1.02
CBFB-209ENST00000568858 TRBV23-1A0A0A0MS06 115 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 BLACEA4D250 179 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 K7ESM1 405 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
CBFB-209ENST00000568858 ZNF28P17035 718 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 SPATS1Q496A3 300 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 VASNQ6EMK4 673 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 ZBTB38Q8NAP3 1195 aaPredicted RBP8.64□□□□□ -1.03
CBFB-209ENST00000568858 TXNDC5Q8NBS9 432 aaKnown RBP8.64□□□□□ -1.03
CBFB-209ENST00000568858 ZSWIM3Q96MP5 696 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 PFDN2Q9UHV9 154 aa8.64□□□□□ -1.03
CBFB-209ENST00000568858 ADCY3O60266 1144 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 TUSC3Q13454 348 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 PTPRN2Q92932 1015 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 BORCS6Q96GS4 357 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 CROTQ9UKG9 612 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 DSEQ9UL01 958 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 DUSP10Q9Y6W6 482 aa8.63□□□□□ -1.03
CBFB-209ENST00000568858 APPP05067 770 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 PAK1Q13153 545 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 LONRF2Q1L5Z9 754 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 ZC3H12BQ5HYM0 836 aaKnown RBP8.62□□□□□ -1.03
CBFB-209ENST00000568858 HABP4Q5JVS0 413 aaKnown RBP8.62□□□□□ -1.03
CBFB-209ENST00000568858 SOGA3Q5TF21 947 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 TMC5Q6UXY8 1006 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.62□□□□□ -1.03
CBFB-209ENST00000568858 PLEKHH3Q7Z736 793 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 MTDHQ86UE4 582 aaKnown RBP8.62□□□□□ -1.03
CBFB-209ENST00000568858 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
CBFB-209ENST00000568858 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 DLL4Q9NR61 685 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 FTSJ1Q9UET6 329 aa8.62□□□□□ -1.03
CBFB-209ENST00000568858 COL6A2P12110 1019 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 IL13P35225 146 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 GRIN1Q05586 938 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 EFEMP1Q12805 493 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
CBFB-209ENST00000568858 SURF1Q15526 300 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 PAN2Q504Q3 1202 aaKnown RBP8.61□□□□□ -1.03
CBFB-209ENST00000568858 IPPKQ9H8X2 491 aa8.61□□□□□ -1.03
CBFB-209ENST00000568858 ADRB1P08588 477 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 FAHP16930 419 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 ZNF827Q17R98 1081 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 KCTD1Q719H9 257 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
CBFB-209ENST00000568858 DEPDC7Q96QD5 511 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 TRAF6Q9Y4K3 522 aa8.6□□□□□ -1.03
CBFB-209ENST00000568858 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
CBFB-209ENST00000568858 PLATP00750 562 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 CHGBP05060 677 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 GABREP78334 506 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 SERINC3Q13530 473 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 TRMT10BQ6PF06 316 aaKnown RBP8.59□□□□□ -1.03
CBFB-209ENST00000568858 DTX3Q8N9I9 347 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 ASXL2Q76L83 1435 aa8.59□□□□□ -1.03
CBFB-209ENST00000568858 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
CBFB-209ENST00000568858 GSTA4O15217 222 aa8.58□□□□□ -1.04
CBFB-209ENST00000568858 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
CBFB-209ENST00000568858 FBXO21O94952 628 aa8.58□□□□□ -1.04
CBFB-209ENST00000568858 ITGB3P05106 788 aa8.58□□□□□ -1.04
CBFB-209ENST00000568858 EPHA5P54756 1037 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms