RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 ABHD16BQ9H3Z7 469 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 KCNMB3Q9NPA1 279 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 KCNH7Q9NS40 1196 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 CFAP45Q9UL16 551 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 PTPN22Q9Y2R2 807 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 PTCH2Q9Y6C5 1203 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 BAZ2BQ9UIF8 2168 aaKnown RBP9.58□□□□□ -0.88
SF3B3-212ENST00000568539 PLXNB2O15031 1838 aa9.58□□□□□ -0.88
SF3B3-212ENST00000568539 RBM47A0AV96 593 aaKnown RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 TBX3O15119 743 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ATP9AO75110 1047 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ARIH2O95376 493 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 BMP15O95972 392 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 HMGCRP04035 888 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 OR52Z1P0C646 297 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ZNF865P0CJ78 1059 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ATP2C1P98194 919 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 TRIM32Q13049 653 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 PTGDRQ13258 359 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ACVR2BQ13705 512 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SLC39A14Q15043 492 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CALCRLQ16602 461 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 MAP3K21Q5TCX8 1036 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 MFSD14CQ5VZR4 134 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CCDC62Q6P9F0 684 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CLEC17AQ6ZS10 378 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CTU1Q7Z7A3 348 aaKnown RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 LINC00301Q8NCQ3 95 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SLAIN1Q8ND83 568 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SCFD2Q8WU76 684 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 HAS1Q92839 578 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 SLC5A5Q92911 643 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CDHR1Q96JP9 859 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 FAM20AQ96MK3 541 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 AGO4Q9HCK5 861 aaKnown RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 PDGFCQ9NRA1 345 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 RCOR1Q9UKL0 485 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 ZHX1Q9UKY1 873 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 MRVI1Q9Y6F6 885 aa9.57□□□□□ -0.88
SF3B3-212ENST00000568539 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-212ENST00000568539 LCTP09848 1927 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 MYH6P13533 1939 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 IPO5O00410 1097 aaKnown RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 LAD1O00515 517 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 BAG4O95429 457 aaKnown RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 TGFB3P10600 412 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 CYBAP13498 195 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 KCNA2P16389 499 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 NCLP19338 710 aaKnown RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 GRK4P32298 578 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 PRPHP41219 470 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 SP2Q02086 613 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 CACNB2Q08289 660 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 ITGB3BPQ13352 177 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 KCNV1Q6PIU1 500 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 TRPV1Q8NER1 839 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 GJA10Q969M2 543 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 UIMC1Q96RL1 719 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 RIT2Q99578 217 aa9.56□□□□□ -0.88
SF3B3-212ENST00000568539 SCAND2PQ9GZW5 306 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
SF3B3-212ENST00000568539 SMCHD1A6NHR9 2005 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 SPTLC2O15270 562 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 DHX15O43143 795 aaKnown RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 ADCY6O43306 1168 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 PPP6R2O75170 966 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 PSMD10O75832 226 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 GABBR2O75899 941 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TXNP10599 105 aaKnown RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 ADCYAP1R1P41586 468 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TXKP42681 527 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 STK38Q15208 465 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 IL17AQ16552 155 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 LY6KQ17RY6 165 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 CCDC144BQ3MJ40 725 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TMEM63BQ5T3F8 832 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 LRCH2Q5VUJ6 765 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 ARL6IP4Q66PJ3 421 aaKnown RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 IQSEC1Q6DN90 963 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 SENP7Q9BQF6 1050 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 BCAS3Q9H6U6 928 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-212ENST00000568539 TBC1D22BQ9NU19 505 aa9.55□□□□□ -0.88
SF3B3-212ENST00000568539 PKD2L1Q9P0L9 805 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms