RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 H3BRB1 525 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 LGR5O75473 907 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 STAM2O75886 525 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 KCNA5P22460 613 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 PDE4AP27815 886 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 PTH1RQ03431 593 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
COMMD4-223ENST00000568301 FCHSD1Q86WN1 690 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-223ENST00000568301 C17orf80Q9BSJ5 609 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 TUT1Q9H6E5 874 aaKnown RBP17.41■□□□□ 0.38
COMMD4-223ENST00000568301 MUC6Q6W4X9 2439 aa17.41■□□□□ 0.38
COMMD4-223ENST00000568301 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 CHMLP26374 656 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 HOXC8P31273 242 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 ICAM3P32942 547 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 WTAPQ15007 396 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 GNPTABQ3T906 1256 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 LEXMQ3ZCV2 418 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 FAM178BQ8IXR5 827 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
COMMD4-223ENST00000568301 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 INSL6Q9Y581 213 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
COMMD4-223ENST00000568301 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 KAT6AQ92794 2004 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 C17orf102A2RUQ5 167 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 SPATA31C2B4DYI2 1134 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 E7EWF7 191 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 SORBS3O60504 671 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 THPOP40225 353 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
COMMD4-223ENST00000568301 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-223ENST00000568301 NEDD9Q14511 834 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 GJD3Q8N144 294 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 FBXO22Q8NEZ5 403 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 DBF4BQ8NFT6 615 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.37
COMMD4-223ENST00000568301 ATP6V0A1Q93050 837 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-223ENST00000568301 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-223ENST00000568301 MAP3K14Q99558 947 aa17.39■□□□□ 0.37
COMMD4-223ENST00000568301 NOP56O00567 594 aaKnown RBP17.38■□□□□ 0.37
COMMD4-223ENST00000568301 CAND2O75155 1236 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 AMHP03971 560 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 LGALS2P05162 132 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 IL9P15248 144 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 PLEKHG4Q58EX7 1191 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 RNPEPQ9H4A4 650 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
COMMD4-223ENST00000568301 PIEZO1Q92508 2521 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 SGSM2O43147 1006 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 FIBPO43427 364 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 SMIM10L2AP0DMW4 78 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 SMIM10L2BP0DMW5 78 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 GNAT1P11488 350 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 HTRA4P83105 476 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-223ENST00000568301 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-223ENST00000568301 XRRA1Q6P2D8 792 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 SENP7Q9BQF6 1050 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 DOCK5Q9H7D0 1870 aa17.37■□□□□ 0.37
COMMD4-223ENST00000568301 GRXCR2A6NFK2 248 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 TREHO43280 583 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 SSTR3P32745 418 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-223ENST00000568301 KIF5BP33176 963 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 ANTXR2P58335 489 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 EPC2Q52LR7 807 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-223ENST00000568301 MRPL38Q96DV4 380 aaKnown RBP17.36■□□□□ 0.37
COMMD4-223ENST00000568301 GPR20Q99678 358 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 OSBPL7Q9BZF2 842 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
COMMD4-223ENST00000568301 PRR33A8MZF0 331 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 PCNX4Q63HM2 1172 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-223ENST00000568301 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-223ENST00000568301 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 NEK9Q8TD19 979 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 SEPT8Q92599 483 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 CUL5Q93034 780 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 RRP36Q96EU6 259 aaKnown RBP17.35■□□□□ 0.37
COMMD4-223ENST00000568301 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
COMMD4-223ENST00000568301 H3BQ06 376 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-223ENST00000568301 MEIS2O14770 477 aa17.34■□□□□ 0.37
COMMD4-223ENST00000568301 DDAH1O94760 285 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms