RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 BRMS1Q9HCU9 246 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 ELP1O95163 1332 aa19.58■□□□□ 0.73
COMMD4-220ENST00000567720 CCDC194A0A1B0GVG4 234 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 BTBD18B2RXH4 712 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-220ENST00000567720 TDP2O95551 362 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 ZNF286BP0CG31 522 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 GJB2P29033 226 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 RTP1P59025 263 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 PSMC6P62333 389 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 SETQ01105 290 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-220ENST00000567720 TRIM60Q495X7 471 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 BRDTQ58F21 947 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-220ENST00000567720 PLA2G4DQ86XP0 818 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 FBXO18Q8NFZ0 1043 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 MLXIPQ9HAP2 919 aa19.58■□□□□ 0.72
COMMD4-220ENST00000567720 GRIN2DO15399 1336 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 SP4Q02446 784 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 PRR16Q569H4 304 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 C1orf53Q5VUE5 145 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 C7orf61Q8IZ16 206 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 SNX21Q969T3 373 aa19.57■□□□□ 0.72
COMMD4-220ENST00000567720 NFASCO94856 1347 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 KAT6AQ92794 2004 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 A0A0U1RQG5 324 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-220ENST00000567720 MAFGO15525 162 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 CABYRO75952 493 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 F2P00734 622 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 USP11P51784 963 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 DGKDQ16760 1214 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 GIMAP8Q8ND71 665 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-220ENST00000567720 KAT2BQ92831 832 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 MBOAT7Q96N66 472 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 UIMC1Q96RL1 719 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 GPR20Q99678 358 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 MTG1Q9BT17 334 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-220ENST00000567720 PCDH10Q9P2E7 1040 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 ATP11BQ9Y2G3 1177 aa19.56■□□□□ 0.72
COMMD4-220ENST00000567720 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-220ENST00000567720 KIF28PB7ZC32 967 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 NOP56O00567 594 aaKnown RBP19.55■□□□□ 0.72
COMMD4-220ENST00000567720 SLC37A4O43826 429 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 LETM2Q2VYF4 491 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 MOXD1Q6UVY6 613 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 SLC43A3Q8NBI5 491 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 PPP1R13LQ8WUF5 828 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 DPF3Q92784 378 aa19.55■□□□□ 0.72
COMMD4-220ENST00000567720 JPH1Q9HDC5 661 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-220ENST00000567720 CYP3A7-CYP3A51PA0A087WV96 503 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 IPO5O00410 1097 aaKnown RBP19.54■□□□□ 0.72
COMMD4-220ENST00000567720 WNT7AO00755 349 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 EVI5O60447 810 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 KPNA6O60684 536 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 LGALS2P05162 132 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 CYP3A7P24462 503 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 SAFBQ15424 915 aaKnown RBP eCLIP19.54■□□□□ 0.72
COMMD4-220ENST00000567720 TRIM50Q86XT4 487 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 KIF3AQ9Y496 699 aa19.54■□□□□ 0.72
COMMD4-220ENST00000567720 RANBP2P49792 3224 aaKnown RBP19.53■□□□□ 0.72
COMMD4-220ENST00000567720 DDX39AO00148 427 aaKnown RBP19.53■□□□□ 0.72
COMMD4-220ENST00000567720 ARVCFO00192 962 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 MSH4O15457 936 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 DHX15O43143 795 aaKnown RBP19.53■□□□□ 0.72
COMMD4-220ENST00000567720 PQBP1O60828 265 aaKnown RBP19.53■□□□□ 0.72
COMMD4-220ENST00000567720 CDK7P50613 346 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 ITGA7Q13683 1181 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 Q4G0T1 1027 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 VTI1AQ96AJ9 217 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 SDF4Q9BRK5 362 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 ZNF577Q9BSK1 485 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 C16orf70Q9BSU1 422 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 SLC9A2Q9UBY0 812 aa19.53■□□□□ 0.72
COMMD4-220ENST00000567720 GSTTP1A0A1W2PQM5 241 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 CCNE2O96020 404 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 TCF7P36402 384 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-220ENST00000567720 TLE2Q04725 743 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 ANKRD33Q7Z3H0 272 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 HSCBQ8IWL3 235 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 FAM126BQ8IXS8 530 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 ETNPPLQ8TBG4 499 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 GJA10Q969M2 543 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 FOXP1Q9H334 677 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-220ENST00000567720 PDLIM7Q9NR12 457 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 DDX25Q9UHL0 483 aaKnown RBP19.52■□□□□ 0.72
COMMD4-220ENST00000567720 ARID2Q68CP9 1835 aa19.52■□□□□ 0.72
COMMD4-220ENST00000567720 MROH7Q68CQ1 1323 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 SIP14410 1827 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 HAS3O00219 553 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 PPFIA4O75335 1185 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 GCFC2P16383 781 aaKnown RBP19.51■□□□□ 0.71
COMMD4-220ENST00000567720 PSEN2P49810 448 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 ACTR2P61160 394 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 MFSD10Q14728 455 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 NBPF20Q3BBV1 942 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 PPP4R3AQ6IN85 833 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 SLC5A5Q92911 643 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms